Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82607 |
Symbol | STT3 |
ID | 4837713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 854229 |
End bp | 856470 |
Gene Length | 2242 bp |
Protein Length | 745 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389028 |
Product | oligosaccharyl transferase subunit |
Protein accession | XP_001383446 |
Protein GI | 150864574 |
COG category | [R] General function prediction only |
COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.214118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CACCATGACA ACCCAGTCCA AACAGTTGAA GGTGTTCGGC ATCCCGGTTG AAACGATCCG TTTACTTTTA CGGGTTATAA TTTTCCTCCT GGTAGCCGGA GCTGCTGTAT CGTCTCGGCT TTTCTCAGTT ATAAGATTCG AATCCATTAT TCACGAGTTT GATCCATGGT TCAACTTCAG AGCCACCAAA TATTTGGTGA CACATTCTTA CTACGAGTTC TTGAACTGGT TTGATGACAG GACATGGTAC CCATTAGGCC GTGTTACTGG AGGAACTTTG TATCCTGGCC TTATGGTGAC TTCTGGAGTC ATTTGGCACA TCTTGAGAGA ATGGCTTGCT TTACCAGTTG ATATCAGAAA TGTTTGTGTT CTTTTGGCAC CTGCCTTCTC TGGTTTGACG GCTGTGTTTA CTTACTATTT GACCAAAGAG ATGAAGGACT CCAATGCTGG TTTACTCGCT GCCATATTTA TGGGTATTGC TCCAGGGTAC ATCTCCAGAT CTGTAGCAGG CTCGTACGAT AACGAAGCTA TTGCTATTAC TTTGCTTATG GCTACTTTCT ACTTCTGGAT TAAGGCAATG AAGTTGGGTT CTGTTTTCTA TGGAACTTTA ACTGCTCTCT TCTACTTCTA CATGGTCTCA GCATGGGGTG GCTATGTGTT CATCACCAAC TTGATTCCCC TCCATGTCTT TGTATTGCTC GTAATGGGAA GATACACCCA TCGTTTGTAT ACGGCCTATT CCACTTGGTA TGCCTTGGGA ACGTTGGCGT CGATGCAAAT CCCATTTGTA GGCTTCTTAC CCATTCGCTC AAACGACCAT ATGGCAGCTT TGGGAGTCTT TGGATTATTG CAGTTGGTGG CTTTTGGCGA TTACGTCAGA TCCAGAATCA ATTCAAAGCA GTTCAAGACT TTCTTGGGAG TTTCGATTGT GCTGGTTACC GTGTTGGGAG TTGGCGCTTT GTTTGCCTTA ACGGCTCTTG GTTGGATCGC TCCTTGGACT GGTAGATTCT ACTCATTGTG GGATACGAAC TATGCCAAGA TTCACATTCC CATTATTGCT TCTGTCTCTG AACATCAGCC TACAGCATGG CCTGCTTTCT TCTTTGATAC TTCCATCTTG ATCTGGCTTT TCCCAGCTGG TATCTACTTG TGTTTCCAGG AGTTAAAGGA TGAACATGTG TTTGTAATCA TCTACGGTGT CTTGTGTTCG TATTTTGCCG GTGTCATGGT TAGATTGATG TTGACCTTGA CTCCAGTAAT CTGTGTCTCT GCAGCTATTG CCTTGTCGAA GTTGTTTGAC ATCTATTTAG ATATCGTAGA TCTCTTTAAG ACAGACACAG AACCAGAAGA TGAAAAGGAA AGTGAAAAAA AGAAGAAGCA AAAGGCCTTC AAATTTCCTA TTCTTCCACT CGTATCGAGG ATACTCGTCA TGGCATCTTT CACCTTCTAC CTATTCTACT TTGTGTTGCA CTGTACTTGG GTCACTTCTA ATGCCTATTC CTCTCCTTCG GTTGTGTTGG CATCTAGAAA TCCAGATGGC TCACAAAACA TCATTGATGA CTACAGAGAA GCCTATTACT GGTTGAGAAT GAACACACCA GAAGATGCAA AAGTCATGGC CTGGTGGGAT TACGGCTACC AGATCGGAGG TATGGCTGAC AGAACCACCT TGGTGGACAA CAACACCTGG AACAACACAC ATATCGCTAC TGTGGGTAAG GCAATGTGTT CCTCAGAAGA TGTAGCCTAC AAGATCTTGA AGCAGCACGA CGTAGACTAC GTGTTGGTGA TCTTTGGTGG GTTAATTGGC TACTCTGGAG ACGACATAAA TAAGTTCCTC TGGATGGTTA GAATTGCCGA AGGTATATGG CCAGATGAAG TGCACGAGAG GGACTTCTTC ACAGATAGAG GTGAGTACAA GGTCGATAAA GAGGCTACCG ACACCATGAA GAACTCGTTG ATGTACAAGA TGTCTTACTA CAGATTCACA GACTTGTACT CCGGCAGAGA TGGAGTAGAC AGGGTCAGAA ACCAAAACAT CCCTGCTGCT AACTCACCAG AATTGAATGT AGTTGAGGAA GCATTTACGT CGCAAAACTG GATTGTCAGA ATCTACAAGG TCAAAGATCT CGATAATGTC GGCAGAGACT TACACCAAGC CTCGGCCTTT GATAAGCAAA CCGACAAACA GTCCAAGAGA TCCAGAACCA TCAAGAGGCC AGCCTTGGAA TTGAGAGAAT AA
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Protein sequence | MTTQSKQLKV FGIPVETIRL LLRVIIFLSV AGAAVSSRLF SVIRFESIIH EFDPWFNFRA TKYLVTHSYY EFLNWFDDRT WYPLGRVTGG TLYPGLMVTS GVIWHILREW LALPVDIRNV CVLLAPAFSG LTAVFTYYLT KEMKDSNAGL LAAIFMGIAP GYISRSVAGS YDNEAIAITL LMATFYFWIK AMKLGSVFYG TLTALFYFYM VSAWGGYVFI TNLIPLHVFV LLVMGRYTHR LYTAYSTWYA LGTLASMQIP FVGFLPIRSN DHMAALGVFG LLQLVAFGDY VRSRINSKQF KTFLGVSIVS VTVLGVGALF ALTALGWIAP WTGRFYSLWD TNYAKIHIPI IASVSEHQPT AWPAFFFDTS ILIWLFPAGI YLCFQELKDE HVFVIIYGVL CSYFAGVMVR LMLTLTPVIC VSAAIALSKL FDIYLDIVDL FKTDTEPEDE KESEKKKKQK AFKFPILPLV SRILVMASFT FYLFYFVLHC TWVTSNAYSS PSVVLASRNP DGSQNIIDDY REAYYWLRMN TPEDAKVMAW WDYGYQIGGM ADRTTLVDNN TWNNTHIATV GKAMCSSEDV AYKILKQHDV DYVLVIFGGL IGYSGDDINK FLWMVRIAEG IWPDEVHERD FFTDRGEYKV DKEATDTMKN SLMYKMSYYR FTDLYSGRDG VDRVRNQNIP AANSPELNVV EEAFTSQNWI VRIYKVKDLD NVGRDLHQAS AFDKQTDKQS KRSRTIKRPA LELRE
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