| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65430 |
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| Symbol | CDC55 |
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| ID | 4838160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 871792 |
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| End bp | 874040 |
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| Gene Length | 2249 bp |
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| Protein Length | 498 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389475 |
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| Product | Protein phosphatase PP2A regulatory subunit B (PR55) (Cell division control protein 55) |
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| Protein accession | XP_001383449 |
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| Protein GI | 150864575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5170] Serine/threonine protein phosphatase 2A, regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0029528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CACAGGTCAA TCTGTCTTTT TGTGTGTCTA CAACTTTCTG CTGTGCCATT GTCAACCACC
CAGTCATCTG TAGCTGTCAC GACATAGCCT CCACTGTCAG AGCTGCTCTC ACCACAAATA
CCGATTCTGA TTCGTCCACC GCACTCATCA ACACTTGCAC CGAAATCTTA TCAACTAATA
TTTGACATTA GAATAACCCA GTTAACATAT AAAACATACG TTAAATTCAC CATTTCATCA
ATACGAACTT ATAAGATACC ATCCACATTT GCAGCAGTCA ACTACTACAA TTATCTATAC
GATACCAACC TTCATCATTC CTGTATATCT ACTATCTTAC AAGTCTTCCA TATCCTATAG
CAATCATATA CAATGACTAT CGAAGAATCA TGGAAGTTTT CCCAATGCTT TGGTGATAAG
GGCGATATCG AAAACATCAC CGAAGCCGAT ATCATCTCGA CGGTCGAATT CGATCACACC
GGTGACTTCT TGGCCACCGG AGACAAAGGT GGTAGAGTAG TCTTGTTTGA ACGCAACCAA
CTGAAAAAGA AGCTGAACTG TGAGTATAAG TTCTTCACCG AGTTCCAGAG TCATGATGCC
GAGTTCGACT ACTTGAAGTC TTTGGAAATC GAGGAGAAAA TCAACAAGAT CAAATGGTTG
AGGTCTTCCA ACAACTCGCT CTATTTGCTT TCCACCAACG ACAAGACTAT CAAGTTATGG
AAAGTCATGG AGAGACAGAT CAAGTTGGTA AACGAAAACA ACTTAAACGG CTTGAACCAC
TTGCCTCTGA AGAACATCAC TATCAACAAC TTGAAGTTGC CCCAGCTTCA ATTGCATGAC
AAGCTCATCC TGGCCCAGCC AAAGAAGATC TACTCCAACG CCCATGCCTA TCACATCAAC
TCTATCTCAG TCAACTCGGA CCAAGAGACG TACTTGAGCT CTGACGATTT GAGGATCAAC
TTGTGGAATT TGAACATTGC TGACCAGTCC TTCAACATTG TTGATATAAA ACCTACCAAC
ATGGAAGAGT TGACTGAAGT CATCACCAGT GCCGAATTCC ATCCTAACCA TTGTAATTTA
TTCATGTATT CCTCATCAAA GGGCACGATC AAATTGTCTG ATATGAGATC CAACTCGCTC
TGCGACACTC ATGCCAAGAT CTTTGAAGAG TACTTGGACC CATCTTCACA CAATTTCTTT
ACGGAAATCA CATCGTCCAT CTCTGACGTT AAGTTCAGCC ACGACGGAAG ATACATTGTG
TCCAGAGACT ACATGACTGT CAAGATATGG GATTTGGCCA TGGAGAATAA GCCCATAAAG
ACGATTAACG TCCACGAACA CTTGAGAGAA AGGTTATGCG ACACGTACGA AAACGATGCC
ATCTTTGACA AGTTCGAAGT GCAATTCAGC GGCGACAACA AGTCGGTGAT GACCGGTTCG
TACAACAATA ACTTCATGAT CTACCCCAAT GCCATTAATG CCAACAACTC TCCTCAACAA
ACTGCTGCTC CCGTAAAGAT GCCTTCATTC AACACGAATT CGTTCAAGAA AAAGAAGAAC
CGTCACGACG AAGAAGACGA AGAAGACGAA GAAGCTGATG AAGCTAAAGA AACACATACT
TCCCCTCTAG AAGATGATGA CGATCAGGAA GAAATCATCT TGCAAGCAGA CAAGTCGGCA
TTCAAATCCA AGAAGTCGGG TCACAGCACC ATGAGACGTA GATTGATGAG TGGAGTAGGC
ACCAACAATG CCAGCGACTT TGACGACATC GACTTCAAGA AGAGCATTTT GCATTTGTCG
TGGCATCCAA GAGAGAACTC TGTAGCCATT GCTGCCACCA ACAACTTGTA CATCTTTTCC
ACGTTGTAAA TGCCCTGGAA AAGATTCTCC GCTACGACTT CATTTATGTT CTTTTTCCTT
CATTTCACTC TTCATTGTTA CGGTTGGTTA TTGTAATTGT AAAGTTTCCA ATTCTATGGC
TTGGTTAATC CCAGTCCATA ACCCATTCTA TTTCACTGTT GCTTTTCTTG TGATGTATTT
CCCATAATAT TGATTCCTGT TTCCTTTTAC TTCGCCAGCG TGGTTTACTA CTTGATACTC
GATTTTGAAA AGCTAAAAAA GAATTATAAT AATCATGAAC AAGAATAAAG TCTAGGGTAA
TGTTCAAAAG TTGCTTTGCA CTAATAGGTA TTATTCTTTC TGCATCTTCG TTGACATATT
TCATTAAAGA CTATAATATA CGTATTTAT
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| Protein sequence | MTIEESWKFS QCFGDKGDIE NITEADIIST VEFDHTGDFL ATGDKGGRVV LFERNQSKKK
SNCEYKFFTE FQSHDAEFDY LKSLEIEEKI NKIKWLRSSN NSLYLLSTND KTIKLWKVME
RQIKLVNENN LNGLNHLPSK NITINNLKLP QLQLHDKLIS AQPKKIYSNA HAYHINSISV
NSDQETYLSS DDLRINLWNL NIADQSFNIV DIKPTNMEEL TEVITSAEFH PNHCNLFMYS
SSKGTIKLSD MRSNSLCDTH AKIFEEYLDP SSHNFFTEIT SSISDVKFSH DGRYIVSRDY
MTVKIWDLAM ENKPIKTINV HEHLRERLCD TYENDAIFDK FEVQFSGDNK SVMTGSYNNN
FMIYPNAINA NNSPQQTAAP VKMPSFNTNS FKKKKNRHDE EDEEDEEADE AKETHTSPLE
DDDDQEEIIL QADKSAFKSK KSGHSTMRRR LMSGVGTNNA SDFDDIDFKK SILHLSWHPR
ENSVAIAATN NLYIFSTL
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