| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57984 |
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| Symbol | MSE1 |
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| ID | 4838079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 116748 |
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| End bp | 118223 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389394 |
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| Product | glutamyl-tRNA synthetase, mitochondrial |
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| Protein accession | XP_001383302 |
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| Protein GI | 150864475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.604011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.184646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TCTGTTCATC CTACAACTCC AGCCAGAACA AGATTCGCTC CTTCTCCAAC GGGATATCTA
CACCTTGGGT CGTTGAGAAC AGCGTTATAC AACTACCTTC TTGCGAAGAA TACAGGAGGC
CAGTTCATCT TACGTCTTGA AGATACAGAT AGAACGCGAT TGGTTCCTGA TGCTGAACAG
AATATCTACG ACAGTCTCAA GTGGTGCAAC TTGACTATAG ATGAGGGCCC AAATGAAGGT
GGTCCCTATG GGCCCTATAG GCAATCTGAA AGAATGGAAA TTTACAAAAA ATATGCCCAA
ATACTCGTAG ACCTGGGCCA TGCATATCGA TGTGTCTGTT CTAAAGACAG GCTCCTTCAC
TTGCGAGAAA CGGCTACAAA GCTAAAGCCT CCAACCACAG TTACATACGA CAGAAAGTGT
TTGCACGAAC AAGAGGGACA ACTCATTGAC AGTAACGACT ATGTGATACG GTTCAAATCA
CCAGATACTT ATGAGCCATT TAAAGATTTG GTCCATGGCA ACCTTAATCT TCAACCACAA
TATAACTACA GCGATAGGCG ATACGACGAT TTCGTAATAG TAAAATCCGA CGGAATGCCC
ACATACCATT TTGCAAACGT AGTTGATGAT CATTTGATGA AAATCACCCA TGTCATTAGA
GGCGAGGAGT GGCTTCCTTC CACACCTAAG CACATTGCCT TGTACAATGC ATTTGGATGG
ACTCCACCAA AGTTCACTCA CATTCCGCTC TTGACTTCGC TTGAAGACAA GAAGTTGTCC
AAGAGATCAG GAGACATTGG AATACTTTCT CTTAAAGAGA AGGGAATCCT TCCTGAGGCA
TTGGTCAACT TTGTAGCTCT CTTTGGTTGG TCTCCAGTTC GCGACGCCCC TGGCGTAAGT
GCGAATGAGT CCATGTCCTT AGAAGAAATC GAGGAGAAGT TTTCTCTAGA TCATTTGACT
AGAGGAAATG CTAAAGTTAA TGACTCAAAG TTATTCTTCT TTAATAAACA TCACCTCCAC
AAAGCTCTCA GGGACCCAAC GAAGATTGAT CAGTATGTCA AGGAAATATT CCCACGTTTA
TCTCAGTTAA GTCATGGAAA ATATAGTGAA GCTGATGTCA AGAAGTTGAT ACAAAATCTC
GGTTCAAGTT TGACTTCAAT TAATGAAATT GAAACCGACC ATGCTTATCT CTTTCAACCC
AACGACTACT CTACATTTCA AAAGATTGGA GATCCTAGTA AGGCTGCATT AATTGTACAG
GCACTTCTTG ACGAGCCGGC AGGTTCGTTT AAGCTGAATG TAGATGTCAT ACTACAAAAG
CATCCTGAAC TTGCAAAGAA GGATATCTTC CAAACAGTGA GACTTGCTTT GTCAGGAGGA
AAGCCTGGAT TGAATGTTCC AACGTTGATC GATACCCTTG GCGAGGATGC CTATAAAGAA
AGACTTAACT CTTTTCTTGT ATATATAAAT AACTAG
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| Protein sequence | SVHPTTPART RFAPSPTGYL HLGSLRTALY NYLLAKNTGG QFILRLEDTD RTRLVPDAEQ
NIYDSLKWCN LTIDEGPNEG GPYGPYRQSE RMEIYKKYAQ ILVDSGHAYR CVCSKDRLLH
LRETATKLKP PTTVTYDRKC LHEQEGQLID SNDYVIRFKS PDTYEPFKDL VHGNLNLQPQ
YNYSDRRYDD FVIVKSDGMP TYHFANVVDD HLMKITHVIR GEEWLPSTPK HIALYNAFGW
TPPKFTHIPL LTSLEDKKLS KRSGDIGILS LKEKGILPEA LVNFVALFGW SPVRDAPGVS
ANESMSLEEI EEKFSLDHLT RGNAKVNDSK LFFFNKHHLH KALRDPTKID QYVKEIFPRL
SQLSHGKYSE ADVKKLIQNL GSSLTSINEI ETDHAYLFQP NDYSTFQKIG DPSKAALIVQ
ALLDEPAGSF KSNVDVILQK HPELAKKDIF QTVRLALSGG KPGLNVPTLI DTLGEDAYKE
RLNSFLVYIN N
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