| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57574 |
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| Symbol | TFC7 |
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| ID | 4837998 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1507061 |
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| End bp | 1508574 |
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| Gene Length | 1514 bp |
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| Protein Length | 439 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389313 |
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| Product | putative transcription initiation factor |
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| Protein accession | XP_001383579 |
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| Protein GI | 126134109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.625866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTA AGCAGATATA TATCGCCAGA CACGGATACC GTGCCAATTG GCTCCCGCTT
CCACATCCAC CCAATCCCAC GGGAATAGAT AGTGATCCAC CTTTGGCACC TCATGGAGTC
GAACAGGCGA GACAGTTAGC TGCTTACTTG ACTTCGTTGC CGAGTACCGA TAGACCGCAG
TTTGTGGTAT CGTCACCTTT CTACCGGTGT GTGGAGACAG CGGAGCCAAT TTCGGAAATG
CTTTCGTTGA AGGTAGTTCT AGAACGTGGA GTAGGTGAAT GGTACAGAAA GGGACGTAAG
GTGATTCCAC AGCCGGCCGA TTACGACCGG TTGACTCGAT TCTTTCCTAA AGTTTTGGTT
GACGAGTCCG AATGGCCCCG TGACACGACC GTAGGTGTGA TTCCAGATCC CACTGGAGAG
TCCAATGAAG ATATCTTTGT CAGAGCCAAT GAGTTCTGGA AGCGTTTCTT ACCAGTATTC
GAAGAAAAGT ATCCAGATAT TGAGACGATA ATGATCATCA CCCATGCTGC TACCAAGATT
GCATTGGGAG CCTCTCTTTT GCGTTTATCG GGTGTTTTGG ACTACATTGA TGACGATAAC
AACACGTTTC GTGCTGGAGC TTGTTCTTTG GATAAGTACG TACGTACCAG CGACGGCTGG
GACATGAAGA TGAATGGAAA CACCGAGTTC TTAGCGGGTG GAGAGGAGAT GCACTGGGAC
TTTCGATCAA CGTATGAAGC GGGCTCCGAC GAAGACATCA AGGCACGGGC AGAGGAAGCT
AAGAGGAAGA AAGAACTACA AGAAAAGAAG AGGGAATCGT CATCTATTGC AGAGGCAGCA
ATCAGAGACG ACAAACTAAG TGTCAACGAC GATTTTGAGG TACGTAACAA ACCTAGATTC
TAATCAGAGT CTACCAGAGT CTTCTAGACA AACTAGAGTC ACCTGGATTC TGTTAGAGTA
TATACCAATC ATAATAAATA ATCTTAGTGA GGATGTTACT AACACAATTT TAGGACTTCT
ACGTGACGGT CGATATTCCC ATGATCGGAA AGGCCCAGAA CTTTGAGGAT TCCAACAATT
TGGAGACCCC AACTTCAAAA GTCAATATTA TCAAGCCGGC AGCACAGTTC CAGATTACAG
AGTTGAATAA CGACAACCCC TTGATCAAAT TGTCGAACAA CAGCACTGCT CCTGGAGTAC
AGGACACCAA CAACGGCAAT GATGCTATCA ACAGCATCAA TGTGATCGAC GGAAAGATCT
ACGAAACCAG CTGGAAAAAG TTGGTTGGAA CAGACTTGAT TTTTGACGAC TACGGTGAAT
TGATAGGTAA GGTAACTGAA CACTTGACCG TCAATGAGAA CGTGAAGATT GTACTTAAAG
ACAGTTCCAA GACCAAAGAA GACAGCGACG AGGAAGAAGA GGTTGACGCG AATGGCGACC
TCAAGACTGC TGGCCAAAGC GCTTTCTTGA AACATGCCAT TAAGCTCGCT AAGAAGAAAG
AAGCGCACTC GTAG
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| Protein sequence | MAVKQIYIAR HGYRANWLPL PHPPNPTGID SDPPLAPHGV EQARQLAAYL TSLPSTDRPQ
FVVSSPFYRC VETAEPISEM LSLKVVLERG VGEWYRKGRK VIPQPADYDR LTRFFPKVLV
DESEWPRDTT VGVIPDPTGE SNEDIFVRAN EFWKRFLPVF EEKYPDIETI MIITHAATKI
ALGASLLRLS GVLDYIDDDN NTFRAGACSL DKYVRTSDGW DMKMNGNTEF LAGGEEMHWD
FRSTYEAGSD EDIKARAEEA KRKKELQEKK RESDFYVTVD IPMIGKAQNF EDSNNLETPT
SKVNIIKPAA QFQITELNND NPLIKLSNNS TAPGVQDTNN GNDAINSINV IDGKIYETSW
KKLVGTDLIF DDYGELIGKV TEHLTVNENV KIVLKDSSKT KEDSDEEEEV DANGDLKTAG
QSAFLKHAIK LAKKKEAHS
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