| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57049 |
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| Symbol | RPI1 |
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| ID | 4837890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1812575 |
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| End bp | 1813045 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389205 |
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| Product | Ribose-5-phosphate isomerase B (Phosphoriboisomerase B) (LACB) (RPIB) |
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| Protein accession | XP_001383634 |
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| Protein GI | 126134219 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.392593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACTG CTGGGCTCAG AATTGTCATT GGTTGCGATG AAGCAGGTTT CGAATATAAG
CAAAAGCTCC AGCAAGACCT TGAAAAGAAT GACTTGGTAT CTGAAGTTAT AGACATTGGT
ATTAATACTA AAGGTGATCA TCTCGCGTAC CCTCATGTTG GTATCAAGGC TGGTGAATTA
ATCAGAGATG GAAAGGCTGA CAGAGCCTTA TTGATCTGTG GTACTGGTTT AGGGGTAGCA
ATCAGTGCAA ACAAGGTTGC TGGTATTAGA GCTGTAACTG CACATGACAG CTTCAGTGTC
GAAAGAAGTA TCCTTTCTAA CAATTGTCAT GTCTTGTGTA TGGGTCAAAG AGTGATAGGT
ATTGAATTGG CTAGAAGATT AGTGGCAGAA TGGTTGACTT ACAATTTCGA TGAATCCAGC
GCCTCTGCCT CAAAAGTAGC TGTTCTCAAA AGATATGAAT CCATCTGTTA A
|
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| Protein sequence | MTTAGLRIVI GCDEAGFEYK QKLQQDLEKN DLVSEVIDIG INTKGDHLAY PHVGIKAGEL
IRDGKADRAL LICGTGLGVA ISANKVAGIR AVTAHDSFSV ERSILSNNCH VLCMGQRVIG
IELARRLVAE WLTYNFDESS ASASKVAVLK RYESIC
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