| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56762 |
|---|
| Symbol | GRP3.2 |
|---|
| ID | 4837794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1358841 |
|---|
| End bp | 1359845 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640389109 |
|---|
| Product | protein induced by osmotic stress |
|---|
| Protein accession | XP_001383553 |
|---|
| Protein GI | 126134057 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.516497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0996379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCA AAGTTTTTGT TAGTGGAGCC ACTGGTTTCA TCGCAAGACA GACCATCAAA
TTACTTTTGT CTAGAGGTTA TAAAGTTGTT GGTTCAGTCA GATCTTCTGA AAAGGGAGAA
ATCTTGAAGA AGTCGTATGG AGCCTCCTTC TCCTACGAAA TTGTAGAAGT TCTTGAACGA
GATGGTGCTT TTGATGAAGC CTTGAAGAAG CACCCAGATG TAACCATCTT TTTGCATACA
GCTTCTCCCG TGACTCCCTT TTCGACAGAA TTAGAGAAGA ATGTTCTAAT TCCTGCCATC
AGCGGAACCA AGTATGTGTT GAAGTCAATT TATGAATATG CCCCTCAGAT AACCAGAGTG
GTGGTGACCA GTTCGTGGGC TGCCATCATT CCTGTCCCAG ATCGTTTCAA CCCTAAGTTT
GTCGGCAGCG AAGATATTTG GAATCCAATT ACTTACGAGG AAGCCAAACA GGATAGCATT
CATGCTTACT TCGGATCAAA AACATTTGCT GAAAAAGCCG CCTGGGAGTT TGTCGAAAAG
AACAAACCTA ACTTCGATCT CTCAACTGTC AATCCAGTGT TTGTCCTTGG TCCTCAGTCA
AAGGATGAAG AAGTGAAGGA TACATTAAAT GTCACTGCTG AATTGGTAAA CTCTATTTTA
AAATTGAACC CCAAGGACGA AGTTCCAACT CTTGAAGGAA ATTTTGTAGA TGTGAGAGAT
GTAGCTTTAG CCCACGTCTT AGCTTTTGAA AAAGAGGAGG CCAAGGGTCA GAGACTTGTT
CTTGTTACTG AAAGATACAG TGGTCAACTT GTATTAGATA TTATCAGAAA GAACTTCCCG
GAACTTGGAG ACAAGTTACC AGTTGGAGTG CCAGGAAGTA AAGATGGTTC CAACTTTGCG
GCACCAAACG ATAAGAAGAC CAGAAGTATA CTTGGTTTCG ATCGTATTAA CTTAGAGAAG
TCGGTAGTAG ATGCAGTTGA GCAGATTCAG AGAGTGAAGG CATAA
|
|---|
| Protein sequence | MSTKVFVSGA TGFIARQTIK LLLSRGYKVV GSVRSSEKGE ILKKSYGASF SYEIVEVLER
DGAFDEALKK HPDVTIFLHT ASPVTPFSTE LEKNVLIPAI SGTKYVLKSI YEYAPQITRV
VVTSSWAAII PVPDRFNPKF VGSEDIWNPI TYEEAKQDSI HAYFGSKTFA EKAAWEFVEK
NKPNFDLSTV NPVFVLGPQS KDEEVKDTLN VTAELVNSIL KLNPKDEVPT LEGNFVDVRD
VALAHVLAFE KEEAKGQRLV LVTERYSGQL VLDIIRKNFP ELGDKLPVGV PGSKDGSNFA
APNDKKTRSI LGFDRINLEK SVVDAVEQIQ RVKA
|
|---|
| |