Gene PICST_44113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44113 
Symbol 
ID4838040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp817244 
End bp817969 
Gene Length726 bp 
Protein Length241 aa 
Translation table12 
GC content39% 
IMG OID640389355 
Productpredicted protein 
Protein accessionXP_001383438 
Protein GI150864569 
COG category[C] Energy production and conversion 
COG ID[COG4229] Predicted enolase-phosphatase 
TIGRFAM ID[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG ATACTGTTGT TCTCGACATC GAGGGCACTG TTTGTCCTAT TACATTTGTG 
AAGGAAAAGC TTTTTCCGTA TTTTTTGGAG AAGTTACCGC TGTTTTTGCT GGAAATCTCG
AATTTCACAC TGCTCCAGGC AGACGACAAA GACCCTATAA AAGCCATTTT GAGCCAATTG
CCCGAGCAAA TAAGAACTTC AAAGGATTCT GTGTTGGAGT ACTTTAACGA TTTGGTTCGT
AGAGATATCA AGGATCCAAT CTTGAAACAA TTGCAGGGAT TCATTTGGAA ATTGGGCTAT
GAAAATGGAG ACTTGAAAGC TCCAGTATAT GAAGACTCAA TTGAATTCAT CAAGACATTT
CCTTCCAAGA CTGAAAACAA AAGAATATAT ATCTATTCTA GTGGAAGTAT CAAGGCTCAG
ATATTGTTGT TTGGCTATGT TGACGAGAAT GGTAAGTCTG TGGATTTGAA TGAATACTTA
TCGGGCTACT TCGACATCAC GACTGCCGGG TTCAAGACTC AATCCAGTTC TTATACCAAG
ATCTTGGAGG ATATTGGTAA GGAGCACGGT GGTTCGGTGT TGTTTTTAAG TGATAATGTG
TTGGAAGTGG AAGCCGCTTT AGAAGCAGGA ATGGAGAGTT ATGTTGTTGT CAGACCAGGC
AATGCTCCAT TAACTGAGGA TGATAAAACG AAATACAAAA TTATTACGTC TCTAGAGCAA
TTGTAA
 
Protein sequence
MAIDTVVLDI EGTVCPITFV KEKLFPYFLE KLPSFLSEIS NFTSLQADDK DPIKAILSQL 
PEQIRTSKDS VLEYFNDLVR RDIKDPILKQ LQGFIWKLGY ENGDLKAPVY EDSIEFIKTF
PSKTENKRIY IYSSGSIKAQ ILLFGYVDEN GKSVDLNEYL SGYFDITTAG FKTQSSSYTK
ILEDIGKEHG GSVLFLSDNV LEVEAALEAG MESYVVVRPG NAPLTEDDKT KYKIITSLEQ
L