| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43820 |
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| Symbol | BMS1 |
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| ID | 4837828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 247143 |
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| End bp | 249659 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389143 |
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| Product | Glycoside hydrolase family 2 (Mannanase, beta-galactosidase) |
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| Protein accession | XP_001383329 |
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| Protein GI | 150864492 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.893374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATAG TGCTTAACAA TTGGAAGTTC AGAGAGTGTC TGGAGGGTAA CGGAGACAAT
AGTCCCTGGT ACCCTGCTAG ATCGGATACC ATTGGCAACC AAGTACATTT GGATCTCTTG
TACAATGGAC TCATTCCAGA TCCGTTCATA GATGATCACG AAAAAAATGT ACAGTGGGTG
GGAAGGACAA ATTGGGAGTA TTGCTCCGTT TTTCAGAATA GCGATTGTTT TCGTCTTCTC
GTAATTGAAG GTTTGGACAC TTTCGCTAAA GTCTATGTCA ATGACCAGCT AGTGTTAGAG
TCGGCTAACC TGTTCAGAAA ATACGTTTTG GATATTGGTG CCTGTCTAAA TTCCAGTGCC
AATATTTTAA GAATCGCTTT CACCAGCAGT CTACATGAAG GAAGACGTCT CGAAAGGATT
CACGGACTCT CGCCATGTTG GAATGGAGAA ACGCTGCGGC TCCATGTTCG AAAACCTCAG
TACCATTATG GCTGGGATTG GGGTCCTATG TTGCTTACTT GCGGACCTTG GAAACCAATT
AGTTTGGTCT CAGGAACATA TGTTAAAGAT TTCTTTGTCA GGTACCTGTT AAACAAAGAC
TTGACTCTGG TAGACCTTCT GATAGAAGTA GATTTGGATC TAGCAGACAA CGACAAAGGC
ACTGATTTGG AGGTATCTAT TATTGACCCA AACGGGCAAT TGGTATATGT CTACGAAGTC
AGCGACATTA AAATGTTCAA TCGACTACAT TATACAATAG ATATGCCCCA TTTGTGGAAC
CCAAGGGGCC ATGGACAACA GGCTCTATAC ACTTTTGAGC TCAAAGTCAA TTCTTTAAAG
CTTGCAACAA GGAGGGCTGG CTTCAGAAAA GTACAACTTG TTCAAGACAA AGACACTATT
GGTAGAACAT TCTACTTCAA AATCAATAAT AAACCTATCT TTGTAATGGG ATCCAACTGG
ATTCCGGCCC ATTCCTTTAC TTCCATTTTG ACTTGCGAAG ACTATCGAAA ATGGCTACAA
CTAGCCATCG ATGGAAACCA CAATCTTGTA AGGGTGTGGG GTGGAGGTAT CTATGAGTCT
GACTCCTTCT ATTCTATATG TGATGAACAA GGAATCCTTG TATGGCAGGA TCTCATGTTT
GCCTGTGGGA TGTACCCAGC TTATTCGGAG TTTGTGGACA ACGTCAAGGA GGAATTGACG
GACCAATTAA AACGACTAAG ACAGTATTCT TCAATAGTTA TCATAGCAGG AAACAATGAA
GATTATCAAG TAGCTGAGGC AAACGGGTTT GAGTTTGGAA TAGATAAACC CTATGACAAA
TTTCCTGCTA GACTTCTTTA TGAAGAAGTT TTCCCAGAGA TTGTGAGTAG ATTAACAAAT
GATGTTCCAT ATATTAGAAG CTCGCCGTAT TCTGATGCTC TTACTAAAAC GAGAGATACC
ACAATTGGTG ATTTGCACCA ATGGGATGTT TGGCATGGGA ATCAAGAGCC ATATCAGAAC
TGGGATAAGC TCAGTGGTAG GTTTGTATCT GAGTTTGGAA TGCTCTCATT TCCCAGTCTT
CAAACTCTCG ACAAGGCTAT TACCAAGAAG GAAGAGCTAT ACCCTGAGTC GTACTTGGTG
GAATACCACA ACAAAGCTGG AGGGTCAGAG CGAAGGTTAG CCACGTATGT CCTAGAGAAT
TTTGCATTGC CTTCTAAATT TGATTTGGAT CATTGGCAAT ATATTACCCA AGTGATGCAA
GCAGATTGCC TAAGCCTAGC GTACCGTAAC TGGAGACGTA AATGGAATAA CTATGAATGC
GGAGGAGCAG TAGTGTGGCA ACTTAACGAC TGCTGGCCGG CTACCAGTTG GTCCATAGTC
GACTTTCACA AGACTCCCAA ACTTGCGTAT TACAGCATCA AGCGTGAATG TGCCCCAATT
GGAATTGCAT GTCGACGCAA TAAAGTCCGA ATCCGGGATC CAGAAGAGCC TGAGGACTTA
TCCGAACAAA CACCTTTGCA TGACTTTTCC AATTACAAGT ACAGTTTAGA CATCTGGGCA
TTTAGCAACA GAGAACAGGA CAATGTTTCA TTGTCTGTTC TGTTTTATAG CAGCGATACA
GGTGAACTAC AGCTGACAAT CACGAAATCT GGCATTTATT TGAAGAATAA TGAGATTTGC
AATATCTTGA ACAAGCACAA CTCTGAATCG CTAGATGGAA GCACTATTGT TCAGGCAGTT
CTTAAGAATG ACAAGGGCGA GATAATACAT CGAAGTAGCG ACTGGCCGCA GCCCATCAAG
CACCTCAACT GGAAGATGTA CAATGAGGAT TTAAGACTTG GTTACAAGGT TATGCAAGGC
AAAATAAAGT TTTCGACAAA CAAGCCTGTC AAGTCTGTCT GCATAAGCAT GCGGAACATG
GATATGCATG TGTTTAGCGA CAATGGTATC GACTTGTTTC CTAATGATAA TCAGGAGGTG
GAAATAGAAG GACTTGAGCC CGATGATCTG ACAATACGAA TACAGCACTT GAAATAG
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| Protein sequence | MPIVLNNWKF RECSEGNGDN SPWYPARSDT IGNQVHLDLL YNGLIPDPFI DDHEKNVQWV
GRTNWEYCSV FQNSDCFRLL VIEGLDTFAK VYVNDQLVLE SANSFRKYVL DIGACLNSSA
NILRIAFTSS LHEGRRLERI HGLSPCWNGE TSRLHVRKPQ YHYGWDWGPM LLTCGPWKPI
SLVSGTYVKD FFVRYSLNKD LTSVDLSIEV DLDLADNDKG TDLEVSIIDP NGQLVYVYEV
SDIKMFNRLH YTIDMPHLWN PRGHGQQALY TFELKVNSLK LATRRAGFRK VQLVQDKDTI
GRTFYFKINN KPIFVMGSNW IPAHSFTSIL TCEDYRKWLQ LAIDGNHNLV RVWGGGIYES
DSFYSICDEQ GILVWQDLMF ACGMYPAYSE FVDNVKEELT DQLKRLRQYS SIVIIAGNNE
DYQVAEANGF EFGIDKPYDK FPARLLYEEV FPEIVSRLTN DVPYIRSSPY SDALTKTRDT
TIGDLHQWDV WHGNQEPYQN WDKLSGRFVS EFGMLSFPSL QTLDKAITKK EELYPESYLV
EYHNKAGGSE RRLATYVLEN FALPSKFDLD HWQYITQVMQ ADCLSLAYRN WRRKWNNYEC
GGAVVWQLND CWPATSWSIV DFHKTPKLAY YSIKRECAPI GIACRRNKVR IRDPEEPEDL
SEQTPLHDFS NYKYSLDIWA FSNREQDNVS LSVSFYSSDT GELQSTITKS GIYLKNNEIC
NILNKHNSES LDGSTIVQAV LKNDKGEIIH RSSDWPQPIK HLNWKMYNED LRLGYKVMQG
KIKFSTNKPV KSVCISMRNM DMHVFSDNGI DLFPNDNQEV EIEGLEPDDS TIRIQHLK
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