Gene PICST_43795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43795 
SymbolKHA1 
ID4837727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp596444 
End bp598894 
Gene Length2451 bp 
Protein Length816 aa 
Translation table12 
GC content41% 
IMG OID640389042 
ProductK(+)/H(+) antiporter 
Protein accessionXP_001383396 
Protein GI150864540 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.515e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.344688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAG AAACAAGCAC CGTAGCCGGT GTTGTGTCAG GGAGAAATCC TTTGGCCTAC 
TCGGCTTCTT CTCCATACAC ACTTTTTATG TTCCAAGCAG TGTTCATCAT TCTCTTTGCT
CACATCATCC ACTATCCACT TAAGAAGCTC CGTCAACCAC GAGTCATTGC TGAAGTCATT
ACGGGTATCC TTTTAGGTCC GACGGTCATG GGAAGAATCC CCAACTTCAC CGCAACCTGC
TTCCCAGCAG CTTCTATTCC TGGCTTGACT TTGTTCGCCA ACATAGGTAT CATTTTGTTC
TTGTTCATTA TTGGTTTGGA AGTTGACATT TCGTTTATTC GCAAGAACTT GAGAGTTGCC
GCCACCGTCG GTTTGATAAA CATGGCTGTT CCATTTGCTT TGGGTTGTGC CATTGCCAAA
GGGTTCTACG ATCAGTATCG TGTGGACGAC GACACTGCGC CTCCTATCAA ATTCACTACC
TACATGGTAT TTATAGCTGT AGCAATGTGT ATCACTGCTT TCCCAGTGTT GGCCCGTATC
TTGACTGAGT TGAACTTGAT TGGCGACAGA GTGGGAACCA TTGTTTTGGC TGCTGGTATC
ACCAACGACT TGACTGGTTG GATCTTATTG GCTTTGACTG TTACATTGGC TAATTCCTCT
AGAGGCATCA ATACCCTCTA CATCTTGCTT TTGACTGTGG CCTGGTTCAT TTTCTTGTTG
TACCCTGTTC GTTTGGCGTT GAGATTCGTC TTGAAGAAGT TCACCAACGA TTTGGTCTCT
GGAGAACCTT CGCAGGTTTC CATGATGTTG ATTGTGGTGA TGGTTTTCAT CTCTGCTTTC
TACACTGACA TCATTGGAGT TCATCCAATT TTTGGAGCTT TCATGGTTGG TATCATTGTC
CCAAGAGATA AAGGATATGT CATTAGAATC ACCGAGAAAT TGGAAGATTT GGTTCATATA
GTATTGATTC CCCTTTATTT CGCTATAGCT GGGTTGAACG TCAACTTGGG TTTGTTAAAC
AAAGGTATTG ACTGGGGTTA TACAATTGGT ATCATTATTC TTGCCATGGT AGGTAAGATC
TTTGGAGGTT TCATCTCTGC CAAGATGAAC AAATTGTTGT GGAGGGAGTC TCTCGCTGTT
GGTGTGCTTA TGTCTTGTAA GGGTATTGTT GAAATCGTTG TATTGAATGT TGGTTTGAAC
GCCGGAATCC TTAGTCACAA GGTCTATTCC ATGTTCATTG TTATGGCGTT AGTGACAACT
TTTGCTACAA CTCCATTGAC TCTTTTGGTG TACCCAGTCT CATACAGAGA AAAGAGAGAC
AAGTTCATCA GGGGTGAAAT CACTTGGGAT GGACAAGCCA TTGAAGGGTC TACCGACTCT
GTCTCAACCA ATCTTTTGGA TGAAGATGGA AACAAAATCT CGTTCGTCAA GTACTCAATT
GAAGACTTGT CCAACTACAG AATCTCTAAG GTTGTCTTGT TGTTGAAGAA AATCGATACT
ATCTCGTACC TTATGACGTT TATACAGAAT TTCAGTTCTT CTGATACAAA CATCAGAGCC
GTTCACCTTC GTGAATTCAC CTCTAGAACT TCTCATCTTT TGGAAGCCTC TTCTACTCAG
TACTATGACC AGGAAAAGGA AAAAGTGGCA CATGACTTTG AGTACAGTGA TTCATTCTCA
ATCTTGTCGA TAATCAAGGT ATTCAGTGAA ATGTTGGGAA TCAACTGCTC GTCCAGATCC
ATATTGACAA CGACCAGGAA TCAAGTTTTG TCTATCAATG ACCAAATTTC CGATTCTTCT
AACTTATTGG TCAGCAGCAT AAAGTTGAAC CAGTTGTCGA CTGAATCTCA GGAATATGAG
TTGTACAAGA ATTTGTTCCT TGAGTGTAGG TCCCATATTG GATTATTGCT TGTCAATGAA
CCTAACAGTA AACCTAGCAC GTCAGCCATC CAACATGCCA AAGACTCCAA GGCTTTCAGC
TTTGTAGAAG ATGATCTGTT CACCAAGAGA GTCATCGACT TGAATTCAAT CAATTTGGTT
CTTACCCACG ACAACTTAGT TAGTTCCAGT GATTTGTTGT CAATCCAGTT GGTTTCTCAA
ATCATTTCTA CGAATCAGAA GTTGCACAAG GTAAACATTT TTATAAAGTC TTCAGGTCAA
TCAGGTCCTT CTTCAGATAA TTTCGAGAAT CAAATCAAGG AATTGTTTTC CTCAAAGAAT
CCTCACATTG ACTTGAGCAT TAACTACATT AAGCCATCTG CCAACTACAG AAACGAAATT
CTCAAAATTA ATCCAAATTT GGCCAATGAG ATCTTTATTA TTGCCAACAA CTCTAGTGGA
GAGACTAACT TGTCACAAGA TGCATTGTTC GACGAAGATG TTGACCAGCT TGTCAACTTG
AGTCTTATCG AATCCTTTCA CATATTGGTT GTTAAGGCTA GTCGGGAATA A
 
Protein sequence
MAVETSTVAG VVSGRNPLAY SASSPYTLFM FQAVFIILFA HIIHYPLKKL RQPRVIAEVI 
TGILLGPTVM GRIPNFTATC FPAASIPGLT LFANIGIILF LFIIGLEVDI SFIRKNLRVA
ATVGLINMAV PFALGCAIAK GFYDQYRVDD DTAPPIKFTT YMVFIAVAMC ITAFPVLARI
LTELNLIGDR VGTIVLAAGI TNDLTGWILL ALTVTLANSS RGINTLYILL LTVAWFIFLL
YPVRLALRFV LKKFTNDLVS GEPSQVSMML IVVMVFISAF YTDIIGVHPI FGAFMVGIIV
PRDKGYVIRI TEKLEDLVHI VLIPLYFAIA GLNVNLGLLN KGIDWGYTIG IIILAMVGKI
FGGFISAKMN KLLWRESLAV GVLMSCKGIV EIVVLNVGLN AGILSHKVYS MFIVMALVTT
FATTPLTLLV YPVSYREKRD KFIRGEITWD GQAIEGSTDS VSTNLLDEDG NKISFVKYSI
EDLSNYRISK VVLLLKKIDT ISYLMTFIQN FSSSDTNIRA VHLREFTSRT SHLLEASSTQ
YYDQEKEKVA HDFEYSDSFS ILSIIKVFSE MLGINCSSRS ILTTTRNQVL SINDQISDSS
NLLVSSIKLN QLSTESQEYE LYKNLFLECR SHIGLLLVNE PNSKPSTSAI QHAKDSKAFS
FVEDDSFTKR VIDLNSINLV LTHDNLVSSS DLLSIQLVSQ IISTNQKLHK VNIFIKSSGQ
SGPSSDNFEN QIKELFSSKN PHIDLSINYI KPSANYRNEI LKINPNLANE IFIIANNSSG
ETNLSQDALF DEDVDQLVNL SLIESFHILV VKASRE