| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31021 |
|---|
| Symbol | RHC18 |
|---|
| ID | 4837941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1541465 |
|---|
| End bp | 1544656 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640389256 |
|---|
| Product | Protein involved in recombination repair |
|---|
| Protein accession | XP_001383583 |
|---|
| Protein GI | 150864658 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.109982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA ATGGGCCTGA TTCTGAAGAG GAAAGCTCAG ATTCAGATAG TGAATCTGAA
TCGTCATCTT CTGATTCTGA CGACGATGAA ATCACAGATG CATCCCCGGC TAAAGCAGGC
GTTATCGAGC GAATCTCGCT AAAGAATTTC ATGTGTCACG ATTCGTTTGA ACTCGAGCTT
GGGCCCCAAA TCAACTTTAT CATTGGAAGA AATGGGTCAG GAAAAAGTGC CATTTTGACC
GGAATATCTG TCGGACTAGG AGCAAAAGCT TCCGACACTA ATCGTGGGAC GTCCATCAAG
TCGTTTATTA AAGACGGGAA ATCAACAGCG AGAGTCACGA TAGTATTTTT GAATGAGGGC
CCCGAAGCAT ATAGACCCGA GGAATTCGGC AAGAGGATTA TTATAGAGAG GAAGCTCCAG
CGAATTGGAG GAAATACCTA CGCCATCAGA TCGCATTCTG GTAGGACGAT TTCGACCAAG
AAAGCCACTC TAGACGAAAT CTTGTACAAA TTCAGCATCA CTATAGACAA CCCCTTAGCA
TTTTTGTCAC AAGATAAGGC TCGTGAATTT TTGATGAACA CTTCAGACGA GCAGAAATAC
AGTCTTTTCA TGTCCGGAGC ATTTATTACG AACATTATAG ACAATTTTGG CAGAACACTG
AAGAACATAG CTGAAATCAA TTCCAAAATT GTGCAAGCAC AACATTATAG AAAGGCATGT
AAAGATAGCT ACAACGAGAT TGCCAGCATA TACAACCGAC ACAAGAAGTC TGATTACTTG
AGAAACAAAC TTCAGATGCT TTATGGGAAA ATCCTCTGGT ATAATGTGAC TACAATAGAG
AAAAAGGTAA ATTCATACGA GGAACAAGCT ATTTCTTTAA AAGAAGAAAT CAAATCTGCA
GACGATAAGA TTGTTGAATG CAACGAATTT ATAGAGAATG CACCAGAAGA GATAGCTGTG
TTGGAGAAAG ACCTTACAGA TAAGGAGTTA TCTCTAGATG ACTTACTGGA GAAGCATTCC
AAGACCAACG ACACCAGGCA AGATGCAAAG AATACAAGTA GCCAATTGTT GGAGGAGTGT
AAGGAAAATG CAAAAGTGAT CCAGTCTTTG CAAGAAAAGA TAGAGACAAG AACCAAAGAT
ATCGAGAAAG AGCAACGAAA GATTGACGAA ATAAATGGGG GATCAAGAGA AAAGCTAAGA
CTAGAATATG ATGAATTGAG TGCAGAAATA CAAAATATCG AAGAGCAACT AACTGGGATA
AAAAGAACTA TTGAAATTAC GAAGTCTTCT GCAAACCCTA ATATGGACAG TCACAAGTCC
ACACTTAAAG ATCGTATGTC TCAACTAGAA TCTCTTCAAA AGAGAAGGCA AGATTCCCAA
CGGGCCCAGA AGGACAGGTA TTTTGCATGG GGCAGGGAAA TGAGCAATGT AATACAAAGA
ATTCGAAGTA CGAATACCTG GCACAAACTA CCAATTGGAC CATTGGGAGC CGATGTAGAA
GTGAAATCAG AATACAGCAA GTGGAGCGCT TTGATAAACA CAGTTCTTAA TAGAATGCTC
GACTCGTTCA TAGTCTGCGA TGAGCACGAC AGAAGACTAT TGGAAAGTAT ACTAGCGCAT
TATTCGATGA AAAAAACCAT TATTGTCAGG AAGTTTGAAA GTTTTGACTT TTCCAATGGT
AAGGTGTCTG GACATCCTAC TTTTGTAGAT ATGATAACAT GCAAGAATGA AGAAGTATTG
CGAGCATTGG TTGATAGTAT GAATATCGAG AAACTTGTCA TCAGTGATAA AAATGAAAGC
CCATCGTCAA TTCTTAACGA AAGAAACGTA ATGAGTGTTT TCACACTATC AACTGTCAAT
TCTGGTACTC GGTACGGTAA AGCAGGAGAT ACTATTCGAA TGGATCCTGT TTACTATTCC
AAGGACATTG TAAAATTAGC TGTTACAGGA GCTGATGAAC TTCATGATGT AGTTAGCTTA
ATCTCGGAGG AAAAGCTTCA GATCGACATA CTACAGAAAA GACTTCGAGA GATGCAATCC
CATCATCAGA ATGAAATCGT TAATCTTGAA AAGAAAAAGA ATGAATTCAA CGAAGTTATC
AGAAGAAAGA AGCGGAAATT GGACGAAATA GAATCTAAGA TTAATGAAGA AGGTGATCTT
TCCAACATCG AGAAATACAA AAGTGAAATT GAAGCACACA AAGACCAAAT CAAAACTAGG
GAGGGGGTTA TAGAGGCGCT TACGGAAGAC TTGGAGTCCC GAAACGAAAT CTTGAAGAAA
CTAAAGGAAA GTGTTAAAGA GCTTAAAGTT CAGTTAACCG AAGCTACAGC AGCTAGAGAT
AGAGCAAAGA AGAACTTGCA TGATTATGAG GTTGAACTTT CTACAAACAA AGATAATAGA
GTGAGTTATT TGTCCGAAAA GAAAAAAATC GAGACCCAAT TGGAAAAGAC AAATGCTAAA
ATAGAAGAAG GAAACAACAA ACTCCAACAG TTGATTGATG AGGCAGAGAA GAAATGCAGA
AGAGAGGAAG TGACGATCAC TTCCAATGAC ACGCAAGATT CCATTCGTGA TGAATATGCT
CTAGTACAAA CACAAGTCAA AGAAGCAGAG AAACAGATTG GCAAACCATT CGAGGAGATC
CAGAATGATT TGATCGAAGC AAAAGAAAGG CAGAGATTAG CAGAGGAAAG TTTAAAAAAC
TTGTCCAGGA CTTATAAGAG CTTGGATTCG GATTTGAAAA TCAGATTTAA TTTCGTTCAT
ACCACTATAT TGTCAAGTGT CGAACAGGCT TCCAGAACCT TCGAAAACTG TATGGCTCTT
AGAGGGTTTA AAGGCTCACT TAGTTTTGAC CATGGAGAGA GAAAATTGAC TCTTCTTGCC
CAAACGAAAA GCGACGACAA ACAACGTGAA GTGACCTCGT TGTCCGGAGG TGAGAAATCG
TTTGCCCAAA TCTCGTTGTT GTTGTCAATT TGGAAGGTTA TGGATTCCAA GATTCGGGGA
TTAGACGAAT TCGATGTCTT TATGGATTCC GTGAACAGGT CCATCAGTAT CAAACTCTTG
TTGAACGAAC TTAGACAGTA TCCGAAGTCT CAGAACATCT TTATTACACC TCAGGATATT
GCCGTTGTTG GTGATTTGAA TAGTAGTGAT GTAAAGATTC ATAAGATGTC TGATCCGAGA
AAAGACACTT GA
|
|---|
| Protein sequence | MTQNGPDSEE ESSDSDSESE SSSSDSDDDE ITDASPAKAG VIERISLKNF MCHDSFELEL
GPQINFIIGR NGSGKSAILT GISVGLGAKA SDTNRGTSIK SFIKDGKSTA RVTIVFLNEG
PEAYRPEEFG KRIIIERKLQ RIGGNTYAIR SHSGRTISTK KATLDEILYK FSITIDNPLA
FLSQDKAREF LMNTSDEQKY SLFMSGAFIT NIIDNFGRTS KNIAEINSKI VQAQHYRKAC
KDSYNEIASI YNRHKKSDYL RNKLQMLYGK ILWYNVTTIE KKVNSYEEQA ISLKEEIKSA
DDKIVECNEF IENAPEEIAV LEKDLTDKEL SLDDLSEKHS KTNDTRQDAK NTSSQLLEEC
KENAKVIQSL QEKIETRTKD IEKEQRKIDE INGGSREKLR LEYDELSAEI QNIEEQLTGI
KRTIEITKSS ANPNMDSHKS TLKDRMSQLE SLQKRRQDSQ RAQKDRYFAW GREMSNVIQR
IRSTNTWHKL PIGPLGADVE VKSEYSKWSA LINTVLNRML DSFIVCDEHD RRLLESILAH
YSMKKTIIVR KFESFDFSNG KVSGHPTFVD MITCKNEEVL RALVDSMNIE KLVISDKNES
PSSILNERNV MSVFTLSTVN SGTRYGKAGD TIRMDPVYYS KDIVKLAVTG ADELHDVVSL
ISEEKLQIDI LQKRLREMQS HHQNEIVNLE KKKNEFNEVI RRKKRKLDEI ESKINEEGDL
SNIEKYKSEI EAHKDQIKTR EGVIEALTED LESRNEILKK LKESVKELKV QLTEATAARD
RAKKNLHDYE VELSTNKDNR VSYLSEKKKI ETQLEKTNAK IEEGNNKLQQ LIDEAEKKCR
REEVTITSND TQDSIRDEYA LVQTQVKEAE KQIGKPFEEI QNDLIEAKER QRLAEESLKN
LSRTYKSLDS DLKIRFNFVH TTILSSVEQA SRTFENCMAL RGFKGSLSFD HGERKLTLLA
QTKSDDKQRE VTSLSGGEKS FAQISLLLSI WKVMDSKIRG LDEFDVFMDS VNRSISIKLL
LNELRQYPKS QNIFITPQDI AVVGDLNSSD VKIHKMSDPR KDT
|
|---|
| |