Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_2329 |
Symbol | RAD7 |
ID | 4838041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 820437 |
End bp | 822293 |
Gene Length | 1857 bp |
Protein Length | 619 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389356 |
Product | nucleotide excision repair protein |
Protein accession | XP_001383439 |
Protein GI | 150864570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGCAGAGGTA GTTCGGGGGT ACGGGGTCCC AACTCGGCGT TAACAGCTTT CCTCCAGAAC GAGGGTATCA CGGACGCGTT CCGTGAGAGA CGTGAGCGAG AACTATTCCA AACAGCCCAG GAGCCAACAA CGGTTGTAGA AGTAGTTGAA GAACAAACTA CTACTTCGTT ATCTTCATTA TCTGCAAGAG CGTCGCGTGT ATCTAGGAGA CTCAGAGCAG CACTACAAGA AGAACAAGAA GAAGACCCTG AAGTTGAGGA AATCAAGAAG GCAGCCAGGC GTAAGAGAAG GGCTGCGAAA CGGGACAGTG ACGATGACGA TGACGATATA GACGATCTCG ACTTCAGTGA TATTGATGAA CTTGAAGATA ACGTCAAGAA ATTTGGGGAA GAAGACACTT GTGTAGACTG TGGAAACACA TTCCACTTAA CCGTGTACTC GCGTTACTTA AAGGATCTGA AAGGTTACGT TTGTGAAGAA TGTAACGAAA TCATCAAAGA AAGAGAACGT AAAGCCCGCG CCAATCAGCA AACTGCTCGT AAACGTAGAA AGAAAGTTGC GCAAGCGTTG TTGAACAAGA CTGTGGTTAG AATCCCAAAG CTTCAGGACA TTTGTATCAA GAAGATTTCA GACAACATCA ACGATGTCGA CGTCTTGGGC GATATTGGCC AGATCAACTT GAACAAGCTC TCCAAAATTT TGTCCAAGAA CCGTTCACTT AACAACAATA CAATGTCATT GTTCTTGTCG CCTGAGTTGA AGTCATTGGA ATTCTGGGAC TGTCTGGACG TCGATTCTGA TTCGTTAAAT AAGATCGCTT CGTATTGCCC AAACCTAGAA TCGCTTACTT TATTCATGTG TGGTCAGCTT CACAACGATA ACTTAAAGTA TTACAACTCA AATCTCAAGA AGTTGACAGA CATTTCCTTA AATGGGCCAT TCTTGATTAG CGAAGCTATG TGGCAGGAGT TCTTTGATGA AAGTGACAAC CGTATAACCA AATTCGAAGT GAGAAACACC CATAGATTTG GAAACGATTC GTTGATCAGT CTTTTGGAAT CTTCAGGTAA GCGGTTGACC TCATTGAAGC TTTCAAGGCT AGACGGACTT GACTCTTCTG CAGTGTATGA CTTAATTCCC CACTATATCC AGACGTCTAC ATTAACTGAC CTCGAGCTCT CGTATCCAAA TAAAGAGGAT TTAATAACAG ACGAGCTTCT CATTAATATC CTTGCAATCT CTGGAGAATC GTTGGTGTCT CTAAATGTAG ATGGGTGTAC TGGCTTAACC GATGCTTTCT TGATTGATGG TGTTTCCAAG TTCTGTCCTA ACTTGACCCA TCTCTCAATG GTGGGTTTGG ATCAAATCAC AGATGACGGT TTTGCCCTGG CTTTTGAAGA GTACTCAAAG GTTAATGGAG GTGGTTTGCT AAATGTAAAT CTTTGTAAGG TCACTGGTCT TGGTGATAAA GCTGTCTATG CTTTGTTCAA GAACTCTTGC AGTACTTTAG TCGAGTTGAA TCTCAACTCA CTCTACAAAC TTTCCAAAGA GTTTTTGTAC CAAGTATTTA CTGATGATCA CAATGTTTAC AAAAAGAAAT TGCAACACCG TATAGATAAT GGCGAGTCAA GTGGTGAGAC CGAACCACCA TTGGTATTGT ATAACCAAAC AAGATTGACA TTGTTGACAA CTCTCGACAT TGGGTTTGTT CGAGCTGTGG ACGACGAAAT ACTTAAATTG ATCGGTGAGA GTTGTCCTAA ACTATCTGTC CTAGAAGTTT ACGGAGACAA CAGATGCACA TCAAGGGCAA AGTTCAGAGA GGGTTTAATG GTTATTGGTC GTCAAAATGA TGAAATT
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Protein sequence | SRGSSGVRGP NSALTAFLQN EGITDAFRER RERELFQTAQ EPTTVVEVVE EQTTTSLSSL SARASRVSRR LRAALQEEQE EDPEVEEIKK AARRKRRAAK RDSDDDDDDI DDLDFSDIDE LEDNVKKFGE EDTCVDCGNT FHLTVYSRYL KDSKGYVCEE CNEIIKERER KARANQQTAR KRRKKVAQAL LNKTVVRIPK LQDICIKKIS DNINDVDVLG DIGQINLNKL SKILSKNRSL NNNTMSLFLS PELKSLEFWD CSDVDSDSLN KIASYCPNLE SLTLFMCGQL HNDNLKYYNS NLKKLTDISL NGPFLISEAM WQEFFDESDN RITKFEVRNT HRFGNDSLIS LLESSGKRLT SLKLSRLDGL DSSAVYDLIP HYIQTSTLTD LELSYPNKED LITDELLINI LAISGESLVS LNVDGCTGLT DAFLIDGVSK FCPNLTHLSM VGLDQITDDG FASAFEEYSK VNGGGLLNVN LCKVTGLGDK AVYALFKNSC STLVELNLNS LYKLSKEFLY QVFTDDHNVY KKKLQHRIDN GESSGETEPP LVLYNQTRLT LLTTLDIGFV RAVDDEILKL IGESCPKLSV LEVYGDNRCT SRAKFREGLM VIGRQNDEI
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