Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_18155 |
Symbol | |
ID | 4838337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 351585 |
End bp | 352889 |
Gene Length | 1305 bp |
Protein Length | 435 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389652 |
Product | predicted protein |
Protein accession | XP_001383696 |
Protein GI | 126134343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.969306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACAAGCTCA ATGACCTTTA CGACACCATC TCTCACATGA CTGTTGACGA TCTTCGCATC CAACAGAATC TCGACCAGGG CAGACAGCTC TTTTCGTTCA ACTCGCAGCA TTGCCTCAAC CGAAAGGAAA TCATCCGCAA TCTTCCCGAC GAGCTCGACT TGTTCAACCC AGAAGAGTTG CGCAAAATAG AGTCTATTTA CGATAAGTTG GGCAAACTCG ATGGCGATAA AACTGTGCAG TTCAAATACT TCAAGAGATA CTTGCGTAAA TACGACGATC CTATCACAGT ACTCATCCAG CAGTTCAACG GAATATCGAA GAAGTTCAAG CTCTTGCGTA GAAAAGAAAT CGACAATTTG TCGCTTGCTC CTGGAGCATA TCTCTACAAC GAGAATTTGT TCAACTTGCC ATACAATGTT GTCGGTTTTG ACCGCAGCAT CTCTGGCTTA CCATTGAGAA ATGGCAAACA CCGCTTAGTG GACCGGTGCT ATCCCCAGGA GTTTGTGGAA GATTTGCAAA TGTACCGGAC CAAGATTCCA ATCCACAAAC GGGATCTTGA CTTCATCGAA ATGGACGAAA ACTCGACCAA TGTAGACCCA AGCAAGATTT TAAAGAGTAA CCAGCTAGCC AACAAAGAGC TTAGCGGAAA TATTAATGGC AACGAGTTGA GTAAACCAGA CCAGATCAAC AATTATCTTA ACAGCATCTA CCATCAATTG GAGGTTCCCA AGAACTCCAT TCTAATAGAC TCTGTGGACA ACTACAATTC GCTTGATCTT CACAACGATG TAGTAATCAG GATAGAGAAC GAGGTGTTGT TAATGAAAAA GACGTTGCAG CACGAAATCG AATCACATAT GAAGTCGTCA TTGAATTCGC GTTTTCTCAT GTATAGCAAC CAGGAGTTGA AACATAACCA ATTCAAGTTG TGTGAGACCC ACTCCACCAA CTCTGTCAAT TCTTCTTCGT TGCTTATCAT TAACTACCAT CTCAAGGAGT TCTCTATGAT TCCCAACTAC TCCATTATCT TAAACTCGAT CAGACAACAG AACAAACTCA GAAACCACTT GTACAAGATC TTCTTGATTA ACTTGGAAGA CCAGATCGAC ACCTTGTTCC GTATCAAGTA CTACAATGAT CGGGACATGA ACAAGTTCAT GAAACGGATT GTTCAAAATA TCGGGAATGT GATCAAGTTT AAGTTGCTCA AGCTCTTCAA ACCATTGTAC GTCAAGGGAG ACTATGACGC TGTCATCTAC AACCCTTACT TGAACAAATC CAACTGCTTC AAGAGAGTCT ACTGG
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Protein sequence | NKLNDLYDTI SHMTVDDLRI QQNLDQGRQL FSFNSQHCLN RKEIIRNLPD ELDLFNPEEL RKIESIYDKL GKLDGDKTVQ FKYFKRYLRK YDDPITVLIQ QFNGISKKFK LLRRKEIDNL SLAPGAYLYN ENLFNLPYNV VGFDRSISGL PLRNGKHRLV DRCYPQEFVE DLQMYRTKIP IHKRDLDFIE MDENSTNVDP SKILKSNQLA NKELSGNING NELSKPDQIN NYLNSIYHQL EVPKNSILID SVDNYNSLDL HNDVVIRIEN EVLLMKKTLQ HEIESHMKSS LNSRFLMYSN QELKHNQFKL CETHSTNSVN SSSLLIINYH LKEFSMIPNY SIILNSIRQQ NKLRNHLYKI FLINLEDQID TLFRIKYYND RDMNKFMKRI VQNIGNVIKF KLLKLFKPLY VKGDYDAVIY NPYLNKSNCF KRVYW
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