Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_17338 |
Symbol | |
ID | 4838089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1617197 |
End bp | 1618621 |
Gene Length | 1425 bp |
Protein Length | 475 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389404 |
Product | predicted protein |
Protein accession | XP_001383932 |
Protein GI | 126134815 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTAG AAACGCACCT ATACGACGTT CTAGGCGTGC CTACGATAGC CACCACGGAG GAGATATCAA GAGCATACAA ACGGCTAGCT CTTAAGTGCC ATCCCGATAA AACCAACCAC AATCCACAGC TAACTGAACA ATTCAAAGAG TCTACGAGAG CTTACGAGAT TCTCAGAGAT GCCAAAAAGA GAGGAATATA CGACCAGTAC GGCGAGGCAG GGTTAGATGG CACGTACCAA CCTCCAGCGA CTGCTACAAA TGTAGCTACG GGTAGTGGCA GATCTTCCTT TTTCAGCCAG AGACCATGCC AAAGATTCGC TTCGGCGACA GATATTTTTT CTCAGGTATT CAACGACATC AACAGCATCT TCTCGGGTGA GACCGTGTTT GAGTTTGCGC CTGGGTTCAT GAATGTTGGT GGAGCACAGG CTCCAGGTGC GGCACATAGT GCTAACATGA TGAAGAATGT TCAGCCAGCT GGTTCTGCAG CCAGGGCTCC GGTTCAAGGT GAGAACATCC ACCACACTTG TAATGTGACG CTTGGGGACT TATATTTCGG TAAGACGATC AAACTTCAGC TTCCTAAGAA CAGCAAGTGC CGTAGCTGTG ATGGGTATGG TGGATTAAGG CCGAAGACCT GTAGAACATG TCGAGGTTCG GGCCAAGTAG TAGTCACATA CTACAACGAG TTTTCCCAAT ACCAACAGAC TGGGTCCTGT AGAAACTGTA GCGGCACCGG GACCTATATA GCTCCATTTG ACAAGTGTAA CGACTGCACT CTAGGATACT TAAGAGAGAA AAAGATTCTT GAGATCAGCG TTTTGCCAGG AACTAAAAAC GGCGACAAAA TCGTTCTACG CGGCGAAGGT GACGAAGGCA GAAACTTGAT TCCAGGTGAC GTTATAATCC ATATTAATCA GACATCACAT CCTTTCTTGG TGCGAAAGTA TAATGATTTG TATATGGAAC ACGAGATAGA CTTGAGAACG GCGTTGTTGG GTGGAGAAGT TCTTATTCCG GACTTCTTAA GAACCAACCA TACCCTCAAG ATTTTGATCA ACGTCCATGG CTTCAGAGAT TTGAACCAAT CTATAGACGA AGACCTTCAG TTGGGTGAAG TCGTGGGAAC GGTGAATCCA GACGAACCCA AAATAGTCAA GGGGTTGGGA ATGCCCATTA ACAACTTGCT CAGTTGCGGA CAATTAGTTC AAAACAGCAA TTTGCCAGCG GAAGCATCTG ATTTCAGAAA GTATAAAAAA GGCAATTTAT TCATTAACTT CAAAGTCAAG TTACCATCTG TTCAAGATTT TCTTAATGGA GAACAGGATT TGACTCTTCT CAGTAAGGTA TTACCCTCCA CCAAGCCAAC GGCCAACATA GCTAGCACTA TTTTTGAAGA GACACATTTG GCCAATATTC CGGGT
|
Protein sequence | MSLETHLYDV LGVPTIATTE EISRAYKRLA LKCHPDKTNH NPQLTEQFKE STRAYEILRD AKKRGIYDQY GEAGLDGTYQ PPATATNVAT GSGRSSFFSQ RPCQRFASAT DIFSQVFNDI NSIFSGETVF EFAPGFMNVG GAQAPGAAHS ANMMKNVQPA GSAARAPVQG ENIHHTCNVT LGDLYFGKTI KLQLPKNSKC RSCDGYGGLR PKTCRTCRGS GQVVVTYYNE FSQYQQTGSC RNCSGTGTYI APFDKCNDCT LGYLREKKIL EISVLPGTKN GDKIVLRGEG DEGRNLIPGD VIIHINQTSH PFLVRKYNDL YMEHEIDLRT ALLGGEVLIP DFLRTNHTLK ILINVHGFRD LNQSIDEDLQ LGEVVGTVNP DEPKIVKGLG MPINNLLSCG QLVQNSNLPA EASDFRKYKK GNLFINFKVK LPSVQDFLNG EQDLTLLSKV LPSTKPTANI ASTIFEETHL ANIPG
|
| |