| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87778 |
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| Symbol | DPL1 |
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| ID | 4836829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1977619 |
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| End bp | 1979430 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388144 |
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| Product | dihydrosphingosine-1-phosphate lyase |
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| Protein accession | XP_001382608 |
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| Protein GI | 150863952 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA ATATAGTGGT GAATTCTTAT CTCTCAGGCA AGAGTTTTGG CGTGCCCTAC
ATGCCTCGGG ATTTTCCAGA GTTAGTCTTC TATATCAAAA CCTTTATTTA TTCCTACACT
ATTCAGACCT TTTATTGGTT TCTGGAGAGG TACTTTTCCG AGCAAGTGTT CACGTATCCG
TGGAATTACT TAGCGTTAGC AAGAGATGTC TGGATTACGT GGGTGGTCTG GACGAAATTG
TCGTACTTCG TGTCGTGGAT TCGTGGTTAT GGCATTGTTC GCTCTCTTCG GGCTTTGTAT
AGAAACGTTT CTACTAGAGT CTTTAAGTTT ATCTTGTCAT TGCCCATTAT CAAGAATAAG
GTCGATTCTG AACTTGCTGC CACGCTAGTA AAAATGGAGA AGGAATTGAT GAAAAATGAC
GACAGTCTCT TGCAATTCCC GTCTCTTCCG GAACAAGGAC TTAGTAAGGA TGCAATTGTA
GAAGAATTGG ATAAGCTTCA GGAATTGAAA CACTCCAACT GGGTCGATGG AAGAGTCAGC
GGGGCTGTTT ATCATGGAGG AGACGACTTG TTGGAATTGC AAGCCGAGGC TTACAGAAAG
TATTCTGTAG CCAACCAGCT TCATCCGGAC GTGTTTCCCG GAGTGCGGAA AATGGAAGCT
GAAGTCGTAG CCATGGTGCT TGAGATTTTC AATGGGCCAA AGGGAAGCTG TGGCTCTACC
ACTTCTGGAG GTACTGAGTC GTTGCTATTG GCTGGTTTAG CGGCCAGAGA ATATGCTAAA
AGAAAAAAGG GATTAACGTC TAACTTTGAA GTTATTGCTC CGGTTACAAT CCATGCTGGT
ATAGAAAAGG CGTGCTATTA TTTTGGCATG AGACTTCACA AAGTGGATTT GGATCCAAAA
ACGTACCAAG TAGACTTGAA GAAGGTCAAA AGACTCATAA ACTCTAACAC GGTATTGTTA
GTAGGGTCAG CACCTAATTT TCCTCACGGC ATTATCGACG ATATCGAAGG TCTTTCGGAC
CTAGCAGTAA AGTACAACAT CCCTCTTCAT GTGGATGCCT GTTTAGGGTC GTTTATTGTT
ACCTTTTTAG AAAGATCAAA AGTCCATGGA GACGTTGATC TTCCTAAATT TGACTTCAGA
GTTCCTGGAG TTACTTCAAT CTCGTGTGAC ACTCACAAGT ACGGCTTTGC TCCGAAAGGT
TCGTCTATTA TCATGTACAG AAATACGCAG TTACGTGAAT GTCAGTACTA CATTCTGAGC
GACTGGACTG GCGGAATGTA TGGCTCACCG ACTTTGGCTG GGTCCAGACC CGGTGCCTTG
ATGGTAGGTT GCTGGGCTAC ATTAGTCAAT TACGGAATCG CCGGATATGA AAAGTCTTGC
AGAGACATTG TAAGTTCGGC AATGAAAGTC AAGAAGGCTA TTCGTTCCGA TAAAGTCTTG
AGCACGTATT TAGAAGTAAT AGGTGAGCCT GTTGCATCGG TTATTTCGTT CAAGGTTAAG
GACGAGTATG CCAAAAAGAA ATTCAGTGTA TATGAATTGG GAGATATCCT CAAAAAGAAA
GGATGGCATT TCCTGACCTT GCAACATCCA CCAGCTCTTC ACTTTGCCTT CACCAAGCTT
ACCATCCCTA TTGTAGATGA AATGCTTGCT GATCTTGTGT CATCAGTACA TGAGTTGGTG
GATCATTGGG AGAATAGTAC TACACCAAGT AGTGATGTTG CTACTATATA TGGGGTTGCT
GGCAGCGTGA GAACTGCAGG TGTCGCCGAT AAAGTGATTG TAGCTTTCTT AGATACTTTG
TATAAGATCT AG
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| Protein sequence | MSDNIVVNSY LSGKSFGVPY MPRDFPELVF YIKTFIYSYT IQTFYWFSER YFSEQVFTYP
WNYLALARDV WITWVVWTKL SYFVSWIRGY GIVRSLRALY RNVSTRVFKF ILSLPIIKNK
VDSELAATLV KMEKELMKND DSLLQFPSLP EQGLSKDAIV EELDKLQELK HSNWVDGRVS
GAVYHGGDDL LELQAEAYRK YSVANQLHPD VFPGVRKMEA EVVAMVLEIF NGPKGSCGST
TSGGTESLLL AGLAAREYAK RKKGLTSNFE VIAPVTIHAG IEKACYYFGM RLHKVDLDPK
TYQVDLKKVK RLINSNTVLL VGSAPNFPHG IIDDIEGLSD LAVKYNIPLH VDACLGSFIV
TFLERSKVHG DVDLPKFDFR VPGVTSISCD THKYGFAPKG SSIIMYRNTQ LRECQYYISS
DWTGGMYGSP TLAGSRPGAL MVGCWATLVN YGIAGYEKSC RDIVSSAMKV KKAIRSDKVL
STYLEVIGEP VASVISFKVK DEYAKKKFSV YELGDILKKK GWHFSTLQHP PALHFAFTKL
TIPIVDEMLA DLVSSVHELV DHWENSTTPS SDVATIYGVA GSVRTAGVAD KVIVAFLDTL
YKI
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