Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_81403 |
Symbol | |
ID | 4837169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1878465 |
End bp | 1879436 |
Gene Length | 972 bp |
Protein Length | 253 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388484 |
Product | predicted protein |
Protein accession | XP_001383130 |
Protein GI | 126133210 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0672955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AATTGCGTTG TCTTTGGCTC GATCTTTAGA GGAAGACCCA CAAACATCGT AGAAACGACT ACTGGATTTC ATTTTGCTGG ATTTTCAGAA GACAAATTTG AAAAATCTCA AAATAGTCTG AACTTTTGTA TTCAATTTAG AAGTCCCAAT CTCATAATAC ACTAATATGT CCAGAAGATA CGACTCCAGA ACAACCATTT TCTCGCCTGA GGGCAGATTG TACCAAGTGG AATATGCGCA AGAGGCAATT TCCATGGCTG GGACTGCCAT TGGTATCTTG TCTACTGAAG GAGTGGTGTT GGCCTGTGAG AAAAAAGTCA CATCCAAGTT GTTGGATAAC GATGGTTCGG CAGAAAAGTT ATACGTCATC AACGACAACA TGATATGTGC TGTAGCTGGG ATGACTGCTG ATGCCTCTAT CTTGGTGAAC AACGCCCGTG TCAATGCGCA GAGCTACTTG AAAACTTACA ACGAAGAGAT TCCTTGTGAA ATCTTGATCA AACGAGTCTG TGACATCAAG CAGGGATACA CACAACACGG TGGTTTAAGA CCGTTTGGTG TAAGTTTTTT GTATGCGGGA TATGACGACC GCTATCAGTT CCAGTTGTTC ACGTCGAATC CTTCAGGAAA CTACTCAGGC TGGAAGGCTA CCAGCATTGG AGCCAACAAC TCTGCAGCCC AGACGTTGTT GAAAAAGGAC TACAAGGACG ACTTGTCGTT GAAGGAAGCC TGTGAATTGG CCATCAAGGT CTTGTCGAAG ACCATGGACT CGTCCAACTT GAACAGCGAA AAGTTGGAGT TTGCTACCTT GAGCTTGTCT AAAATTAATC CCGGTCAGGT GATCCATAAG ATCTGGAAGG ATTCTGATAT AGACTCGTTG ATCAAGGAGT CAGGTGTTTT GGACGACAAA AATACCGACG ACGACTAGAT ACATACGAAT AAACTAACAA AGGAATAAAG TAGAAATATG TT
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Protein sequence | MSRRYDSRTT IFSPEGRLYQ VEYAQEAISM AGTAIGILST EGVVLACEKK VTSKLLDNDG SAEKLYVIND NMICAVAGMT ADASILVNNA RVNAQSYLKT YNEEIPCEIL IKRVCDIKQG YTQHGGLRPF GVSFLYAGYD DRYQFQLFTS NPSGNYSGWK ATSIGANNSA AQTLLKKDYK DDLSLKEACE LAIKVLSKTM DSSNLNSEKL EFATLSLSKI NPGQVIHKIW KDSDIDSLIK ESGVLDDKNT DDD
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