| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81319 |
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| Symbol | URK1 |
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| ID | 4837048 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1850988 |
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| End bp | 1852526 |
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| Gene Length | 1539 bp |
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| Protein Length | 504 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388363 |
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| Product | uridine kinase |
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| Protein accession | XP_001382581 |
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| Protein GI | 150863930 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase
[COG0572] Uridine kinase |
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| TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0146953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.484619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGGACCGAAA TGACTTCGTT GGAAGAGCCT AGGCCACGTC GGTTCAGCCG AATTGCGCCA
GACAGCGACG AGTCGACATC ATTTTTCATG TCGTCAGAAA CATTACCCAC CGAGTCTGCT
ATCATGACTC CAGTAGGATC TTTGCATCAC GATCTGGATA CACCCAGAGC TTCTTATCTT
CCTCCTTGGA CAGAACCGTA TATCATTGGA GTCGCAGGGA ACTCTGGATC TGGAAAAACC
TCCATTTCGC AGAAAGTTAT CCAGGAATTG AACCAACCAT GGACGATTTT GCTTTCGTTT
GATAACTTCT ACAATCCTTT GAACGAAGAA GAAAGAAAGC AAGCCTTCAA CAACAATTTT
GATTTTGATA CCCCAGCCTC TTTGGATTTG GATTTGTTAG TGAAAACGGT GAAATCTTTG
AAAAGCGGTG AGAAAACACA AATTCCGGTG TACTCGTTCC AGCACCATAA TCGTACCAAT
AAGTCTACGA CCATCTACGG AGCCAATGTG ATCATTATTG AAGGTATTTA TGCCTTGTAT
GACCAGAGAT TGCTTGACTT GATGGACTTG AAGATTTACG TCGACACGGA CTTGGATATC
TGTTTGTCTC GAAGATTGAC CAGAGACATC TTGTATCGTG GTCGTGACTT GGCAGGTGCC
ATCAAACAAT GGGAGACGTT TGTCAAACCT AACGCCGTCA AACACGTCAA CCCGACTATG
AACAACGCCG ACTTAGTGAT TCCACGAGGC TTGGACAATC TGATTGCCAT CAACTTGATG
ATAAAACATA TTCAGATCCA ACTAGCACTT AAAAGTTCAG CGCATTTGAA GTACTTGAAG
GAGTTGGGTG TTAATATCAA CTTCGATGTG TCCAAATACA ACATTAAGGT TTTACCGGCA
AATAACCAGA CGAAAGGAAT CAACTCTTTA CTCTTTGACG TCAATACTGA GAGGTCAGAT
TTCATCTTTT ATTTTAACCG TATCAGTGCA CTTATTATAG AGTTAGCATT AGAGTTGGTT
ACAGACTATG AGCCTGTGCG CATTAACGAC AACTTCAACG GCTTGAGAAT GGTTAACGAG
ATCATGGCAG TTAATATTAT CCGTTCGGGA GATTGCTTTA TGTCTTCGAT CAAAAGGACT
TTTCCAGAAA TCAGCATCGG AAAGCTTTTG ATTCAAAGTG ACTCTAGAAC TGGTGAACCA
CAATTGCATT TTGACTCCTT GTCAAAGGAA ATGAGCGGAG GAAAGAAGAT CTTGTTGTTT
GACTCCCAGA TCATTAGTGG AGCTGCGTCC ATCATGGCTA TCCAGGTATT AATTGACCAC
AAGGTGAACG AAGAGGATAT CATCTTATGT TCGTATCTTT CCACAGAGAT AGGATTGCGT
CGTATCGTTA ACGTTTTCCC CAAGGTCAAC ATTGCAGTTG GTAAATTGTC GTCTATCGAC
GGTAGTGAAA AGAAATGGTA CAATGAGGAA ATGTTTAAGG ATAGCGACTG GCATTTTAGA
AATAGATTTA TAGACAGTTT GTACTTTGGC ACGGACTGA
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| Protein sequence | MTSLEEPRPR RFSRIAPDSD ESTSFFMSSE TLPTESAIMT PVGSLHHDSD TPRASYLPPW
TEPYIIGVAG NSGSGKTSIS QKVIQELNQP WTILLSFDNF YNPLNEEERK QAFNNNFDFD
TPASLDLDLL VKTVKSLKSG EKTQIPVYSF QHHNRTNKST TIYGANVIII EGIYALYDQR
LLDLMDLKIY VDTDLDICLS RRLTRDILYR GRDLAGAIKQ WETFVKPNAV KHVNPTMNNA
DLVIPRGLDN SIAINLMIKH IQIQLALKSS AHLKYLKELG VNINFDVSKY NIKVLPANNQ
TKGINSLLFD VNTERSDFIF YFNRISALII ELALELVTDY EPVRINDNFN GLRMVNEIMA
VNIIRSGDCF MSSIKRTFPE ISIGKLLIQS DSRTGEPQLH FDSLSKEMSG GKKILLFDSQ
IISGAASIMA IQVLIDHKVN EEDIILCSYL STEIGLRRIV NVFPKVNIAV GKLSEKKWYN
EEMFKDSDWH FRNRFIDSLY FGTD
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