Gene PICST_76559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76559 
SymbolNUO24 
ID4836990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp130000 
End bp130956 
Gene Length957 bp 
Protein Length239 aa 
Translation table12 
GC content44% 
IMG OID640388305 
Productsubunit NUHM of NADH:Ubiquinone Oxidoreductase 
Protein accessionXP_001382255 
Protein GI126131460 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.261149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.246661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCTTATAGT TCATATAGTG TACAAACGCA TTCGTCTTGT GTCGTGCCTG TCAATTGCGG 
TTGAGAATTT GAGTCTAGTA GCTCTTTGCA TATAAACATT TGTAAATTTC ACATTTGTTC
CCATTTTTCA TTTTTCCATA TTATTCATAC AACACCATGT TGAGCCGTTT CGTCACCAAG
ACCGCTGTCA ACAAGTCCGC CGTCTCGGCC ATGTCCAAGA GATACTCGGC CATCATTTCT
GTCCACAGAG AATCCAAGCT TGACAACCAG AACATAGCTT TTGAATTCAA CTCTGAGAAC
TTGAAGAGAG CCGACGAAAT CATCGCCAAA TACCCACCAC AATACAAAAA AGGAGCTGTG
ATGCCCTTGT TGGACTTGGG CCAGCGTCAA TTAGGATTTA CTTCCATTTC CGTAATGAAC
TACGTCGCTA AGATGTTGGA CATGCCTCCT ATGAGAGTAT ACGAAGTGGC TACCTTCTAC
ACCATGTACA ACAGAAAACC CATGGGCAAA TACAACATAC AAGTGTGTAC TACCACCCCC
TGTCAGTTGT GTGGCAGTGA CGGTGTCATG AAAGCCATCC AGGACCACTT AAAGGTAAAG
CCTGGCCAGA CTACTCCAGA CAATTTGTTT ACATTGCAAG AAGTTGAATG TTTGGGTGCC
TGTGTCAATG CTCCTATGAT CGCAGTAAAC GACGATTTCT ACGAAGACTT GACCCCAGAG
GCTACTGTAG ACATCTTGAA GCAGTTCCAA GCTGGCAAAG AACCAAAGAT TGGACCCATC
AGTGGCAGAG AAAGCTGTGA GCCTCACAGT GGTGCCAAGG TGTTGTTGGG AGCCGAACCT
ACCGATCTCA GAAAGTTCAC CAGAGCCGAC TTATAGGCTC TTCATAGATG TACCGTACAT
AGATGTAAGT ACACAGATGT AAGTACATAA AAGCATATTG TTTGACATTT TTGCGTG
 
Protein sequence
MLSRFVTKTA VNKSAVSAMS KRYSAIISVH RESKLDNQNI AFEFNSENLK RADEIIAKYP 
PQYKKGAVMP LLDLGQRQLG FTSISVMNYV AKMLDMPPMR VYEVATFYTM YNRKPMGKYN
IQVCTTTPCQ LCGSDGVMKA IQDHLKVKPG QTTPDNLFTL QEVECLGACV NAPMIAVNDD
FYEDLTPEAT VDILKQFQAG KEPKIGPISG RESCEPHSGA KVLLGAEPTD LRKFTRADL