| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76215 |
|---|
| Symbol | RPS17B |
|---|
| ID | 4836988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 2460998 |
|---|
| End bp | 2462117 |
|---|
| Gene Length | 1120 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640388303 |
|---|
| Product | 40S ribosomal protein S17.e.B |
|---|
| Protein accession | XP_001383226 |
|---|
| Protein GI | 126133402 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1383] Ribosomal protein S17E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.480741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTTCTCTTTT GATTGTTAGT TATTCATATA CACAGTTAAA GTAATCAGCA AAGATGGTAT
GTAATGTTTG ATATCAACAT GTAGTGGTCA AGCAGAGGCA TGTCAAGAAG GGATACATCA
TCGAATATAC CAAGAATATA ATTAAGACAG CGAATCCATT GACGTTTGAT AGAATCGAGT
TCGATATGAA ATTTCTGCAT GAACAACCAT TCACTAGAAC ATAAGGAACG AAAAGAAAGA
TAAAACTATC AACAGCAAAT ACGTAAGAGG ATGCAAACTA TATAGTCCAG CATTCAAACA
TTGATATCTA AAGGCATCCT GATTAAAAAA ACAAGATCTT CACTATTGAT AAGAAATGAC
ACTTTGTTTG AGTAAAGAAT ACCTTCCACC GACAATGGAA TACATTATAA TGATTCAGAA
CTGAAAGAAA GGACAAGTAC TTTACCATGA AGTTAAATAA AATTGAAATG ATGTGGAATA
AGTTATCGTT TACTATGTGC AACAATATTT GTCTACCCTG ACTTGCCAAA TGCTTTTTCC
CTTACCACTG ACATTAATGA ACAATATACT AACCAAGTAT TTAGGGTCGT GTTAGAACTA
AAACCGTTAA GAGAGCTTCC AAGGTCTTGA TTGAACGTTT CTACCCTAAG TTAACCTTAG
ACTTCGAAAC CAACAAGAGA TTGACCTCTG AAATCGCTGT CATCCAATCC AAGAGATTAA
GAAATAAGAT TGCTGGTTAC ACCACCCACT TGATGAAGAG AATTCAAAAG GGTCCAGTTA
GAGGTATTTC TTTCAAGTTA CAAGAAGAAG AAAGAGAAAG AAAAGATCAA TACGTTCCAG
AAGTCTCTGC TTTGGACTTA TCTCACACCA ACGGTCAATT GGAAGTTGAC TCTGAAACCG
CTGACTTGGT CAAGACCTTG GGTTTCAAGA TCCCAATCCA AACCGTCTCC ATCTCTGCTC
AAAGAGGTCC AAGACGTTTT GCTAAGAGAA ACTAATTTTA GGAATTGCAT CATAGCTTAA
CCAATATATT ATTCATGTTA ATTTTCTTGG GGTATTCTTG AAATTTGTAT AGTTACAAAA
CGCACTCTTT ATATGTACTT AATAAAAATA TCATAAAAAA
|
|---|
| Protein sequence | MGRVRTKTVK RASKVLIERF YPKLTLDFET NKRLTSEIAV IQSKRLRNKI AGYTTHLMKR
IQKGPVRGIS FKLQEEERER KDQYVPEVSA LDLSHTNGQL EVDSETADLV KTLGFKIPIQ
TVSISAQRGP RRFAKRN
|
|---|
| |