Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_70572 |
Symbol | PMT2 |
ID | 4836956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2242912 |
End bp | 2245424 |
Gene Length | 2513 bp |
Protein Length | 759 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388271 |
Product | Phospho Mannno Transferase; dolichyl-P-mannose-protein mannosyltransferase |
Protein accession | XP_001382657 |
Protein GI | 150863992 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0562818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCTTGACTGC TCAATTCGCC TTCACTCTTT CCGTTCTTCA TCTTATTGGT CCTGCTAGGT CTCCTCCATC ATGTCTGCGT CCGGTGTGTA CTCAACCGAC AAAGCCAGTC TTCGTCAAAG AAGCGACAAG GCTGTAGCTG TAAACGGTGA AAGTGAACTT GAAATCGATG CTACCGCTGA AAAACTTGCT CAGCTCGACG ACTCGTCTGA ACTCTGTGCT TCTTTGGCCA AATTGGAGCA AATCGTCGCT CCAATTTTTT TCACTGCCAT CTCGTTCTTT GTCAGATTTT ACAGAATCTC TGTCAACGAT GCTGTCGTAT GGGACGAAGC CCATTTCGGC AAGTTTGGTT CCTACTACTT ACGTCACGAG TTCTACCACG ATGTTCATCC TCCTTTGGGC AAGATGTTAA TCGGTTTGTC CGGCTACTTG GCTGGCTACA ATGGCTCGTG GGATTTCCCA TCTGGTGAAA AGTACCCAGA CTACATTGAC TATACCAAGA TGAGACTCTT CAACGCCACG TTTTCTGCCT TGTGTGTTCC CTTGGCTTAT TACACCGGTA AGGAAATCGG CTTCTCCGTT CTCACGACCT GGTTGTTTAC CTTGATGGTC ACGTTGGAGT TGTCGTATGT CACATTGGGT AAGTTTATCT TGTTGGACTC CATGCTTCTC TTCTTCACCG TAGCCACTGT GTTCTGTTTC CTGCGTTTCA ACAACTACAA CAACGCTAAG TCCGAGTTCT CGAGAAAGTG GTGGAAATGG ATCTTATTGA CCGGTTTCTC CATTGGCTGC ACCTGTTCCG TAAAGATGGT TGGTTTGTTT GTCACCACAC TTGTAGGTAT ATACACTGTG GTAGATCTCT GGAACAAGTT GGGTGATAAG TCCATCTCAT GGAAGAAGTA CACGCAACAC TGGCTTGCCA GAATCCTTGC GTTAATTGCT ATCCCCATTT CCATCTTCTT ACTTTCGTTC AAACTCCACT TTGATCTCTT GTACAAGTCT GGAACAGGTG ACGCCAATAT GTCGTCGCTT TTCCAAGCCA ACTTAGTCGG CTCCGATGTT GGGGGTGGTC CCAGAGAAAT CTCTATTGCT CATTCAGTAA TCACATTGAA GAACCAAGGC TTGACCGGTG GACTTTTGCA TTCTCATGTT CAGACTTTCC CAGAAGGTTC CAAGCAGCAA CAGGTTACTA CCTACGGCCA CAAGGATTCT AATAACAACT GGGTGTTCCA GAGATCGAGA GGTGAGACCC CCTATGATAC CTCTAACAAC AACACTGAGA TCGAATACGT TCTTGACGGC ATGAAGATCA GAGTAATGCA CCCACAGACT GGAAGAAACT TGCACACTCA CGATATTCCT GCTCCTGTCA CCAAGGGCCA CCATGAAGTA GCCTGCTACG GTAACATGAC CATTGGTGAC TTGAAGGATA ACTGGTTCGT TGAAATCGTA GAACAGCAGT CTGACGAAGA CAAGTTGAGA CTTCATCCTT TGACTACTTC CTTCAGATTG AAGAATGAAG TCATGAACTG TTACTTGGGT GTGACAGGAG TATCTTTGCC TCAGTGGGGT TTCAGACAAG GTGAAGTTGC CTGCTTCAAG AACCCATTCA AGAAGGACAA GAGAACATGG TGGAACATTG AAAACAACAG AAACGAGATC TTACCACCTG CTCCCGCTGA CTTCAAGTTG CCCAAGACAA AGTTCCTCAA GGACTTTATC CAGCTTAACG TCGCCATGAT GGCTACCAAC AATGCTTTGG TTCCTGACTC TGATAAGCAA GACGACTTGG CTTCTGAGGC ATGGCAATGG CCTACCTTAA ATGTAGGTAT CAGAATGTGT AGTTGGGCCA AGGATAAGGT CAAGTACTTC TTGATTGGTT CCACAGTTAA CACCTGGGCT TCTTCTGTAG GTGTGGTTCT CTTTGCTTTC CTCACTCTCT ACTACTTGAT CAGATGGCAG AGACAGATTG TCGACTTCCC AGCCAGCGAG CCTAACAAGT TGAAATTGTT CTTGATGGGA GGTATCTACC CAATGTTCGG CTGGGGTTTA CATTTCATGC CATTCGTCAT TATGGGAAGA GTCACTTACG TCCATCATTA TGTGCCAGCG CTCTACTTCG CCTTGATTGT GTTGTGCTAC GAAATCGAAA GCTTCACTTC TCCTTTGAAC AAGGGTGGTT CCGTCAAGAA ATACATCCGT GGTGCCATCT ATATAGCCTG GTACGCTGCT GTTATTGGTG CTTTCTGGTA CTGGAGATAC ATCTCGTGGG GTTTGGAGGG TGCTAAGGAA GACTGGAAGC ACTTGGACCT CTTACCAACA TGGAGAATTT CTGACGACAG ATACCGCTAG GTTTTGCAGT GAAACAATGA TGATGCTACC ATTCATTGTT CTATTATTAT ATTTGTTAAT TGCAACTGTA ATGGCTGCGA ATAAAATTGG AGATGATGAA GATGCACTCA TATATATAGG TAAAGACATA GATATGTGTT TGTACAATAC AGGATGATAT CAG
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Protein sequence | MSASGVYSTD KASLRQRSDK AVAVNGESEL EIDATAEKLA QLDDSSELCA SLAKLEQIVA PIFFTAISFF VRFYRISVND AVVWDEAHFG KFGSYYLRHE FYHDVHPPLG KMLIGLSGYL AGYNGSWDFP SGEKYPDYID YTKMRLFNAT FSALCVPLAY YTGKEIGFSV LTTWLFTLMV TLELSYVTLG KFILLDSMLL FFTVATVFCF SRFNNYNNAK SEFSRKWWKW ILLTGFSIGC TCSVKMVGLF VTTLVGIYTV VDLWNKLGDK SISWKKYTQH WLARILALIA IPISIFLLSF KLHFDLLYKS GTGDANMSSL FQANLVGSDV GGGPREISIA HSVITLKNQG LTGGLLHSHV QTFPEGSKQQ QVTTYGHKDS NNNWVFQRSR GETPYDTSNN NTEIEYVLDG MKIRVMHPQT GRNLHTHDIP APVTKGHHEV ACYGNMTIGD LKDNWFVEIV EQQSDEDKLR LHPLTTSFRL KNEVMNCYLG VTGVSLPQWG FRQGEVACFK NPFKKDKRTW WNIENNRNEI LPPAPADFKL PKTKFLKDFI QLNVAMMATN NALVPDSDKQ DDLASEAWQW PTLNVGIRMC SWAKDKVKYF LIGSTVNTWA SSVGVVLFAF LTLYYLIRWQ RQIVDFPASE PNKLKLFLMG GIYPMFGWGL HFMPFVIMGR VTYVHHYVPA LYFALIVLCY EIESFTSPLN KGGSVKKYIR GAIYIAWYAA VIGAFWYWRY ISWGLEGAKE DWKHLDLLPT WRISDDRYR
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