Gene PICST_70572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70572 
SymbolPMT2 
ID4836956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2242912 
End bp2245424 
Gene Length2513 bp 
Protein Length759 aa 
Translation table12 
GC content45% 
IMG OID640388271 
ProductPhospho Mannno Transferase; dolichyl-P-mannose-protein mannosyltransferase 
Protein accessionXP_001382657 
Protein GI150863992 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0562818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTTGACTGC TCAATTCGCC TTCACTCTTT CCGTTCTTCA TCTTATTGGT CCTGCTAGGT 
CTCCTCCATC ATGTCTGCGT CCGGTGTGTA CTCAACCGAC AAAGCCAGTC TTCGTCAAAG
AAGCGACAAG GCTGTAGCTG TAAACGGTGA AAGTGAACTT GAAATCGATG CTACCGCTGA
AAAACTTGCT CAGCTCGACG ACTCGTCTGA ACTCTGTGCT TCTTTGGCCA AATTGGAGCA
AATCGTCGCT CCAATTTTTT TCACTGCCAT CTCGTTCTTT GTCAGATTTT ACAGAATCTC
TGTCAACGAT GCTGTCGTAT GGGACGAAGC CCATTTCGGC AAGTTTGGTT CCTACTACTT
ACGTCACGAG TTCTACCACG ATGTTCATCC TCCTTTGGGC AAGATGTTAA TCGGTTTGTC
CGGCTACTTG GCTGGCTACA ATGGCTCGTG GGATTTCCCA TCTGGTGAAA AGTACCCAGA
CTACATTGAC TATACCAAGA TGAGACTCTT CAACGCCACG TTTTCTGCCT TGTGTGTTCC
CTTGGCTTAT TACACCGGTA AGGAAATCGG CTTCTCCGTT CTCACGACCT GGTTGTTTAC
CTTGATGGTC ACGTTGGAGT TGTCGTATGT CACATTGGGT AAGTTTATCT TGTTGGACTC
CATGCTTCTC TTCTTCACCG TAGCCACTGT GTTCTGTTTC CTGCGTTTCA ACAACTACAA
CAACGCTAAG TCCGAGTTCT CGAGAAAGTG GTGGAAATGG ATCTTATTGA CCGGTTTCTC
CATTGGCTGC ACCTGTTCCG TAAAGATGGT TGGTTTGTTT GTCACCACAC TTGTAGGTAT
ATACACTGTG GTAGATCTCT GGAACAAGTT GGGTGATAAG TCCATCTCAT GGAAGAAGTA
CACGCAACAC TGGCTTGCCA GAATCCTTGC GTTAATTGCT ATCCCCATTT CCATCTTCTT
ACTTTCGTTC AAACTCCACT TTGATCTCTT GTACAAGTCT GGAACAGGTG ACGCCAATAT
GTCGTCGCTT TTCCAAGCCA ACTTAGTCGG CTCCGATGTT GGGGGTGGTC CCAGAGAAAT
CTCTATTGCT CATTCAGTAA TCACATTGAA GAACCAAGGC TTGACCGGTG GACTTTTGCA
TTCTCATGTT CAGACTTTCC CAGAAGGTTC CAAGCAGCAA CAGGTTACTA CCTACGGCCA
CAAGGATTCT AATAACAACT GGGTGTTCCA GAGATCGAGA GGTGAGACCC CCTATGATAC
CTCTAACAAC AACACTGAGA TCGAATACGT TCTTGACGGC ATGAAGATCA GAGTAATGCA
CCCACAGACT GGAAGAAACT TGCACACTCA CGATATTCCT GCTCCTGTCA CCAAGGGCCA
CCATGAAGTA GCCTGCTACG GTAACATGAC CATTGGTGAC TTGAAGGATA ACTGGTTCGT
TGAAATCGTA GAACAGCAGT CTGACGAAGA CAAGTTGAGA CTTCATCCTT TGACTACTTC
CTTCAGATTG AAGAATGAAG TCATGAACTG TTACTTGGGT GTGACAGGAG TATCTTTGCC
TCAGTGGGGT TTCAGACAAG GTGAAGTTGC CTGCTTCAAG AACCCATTCA AGAAGGACAA
GAGAACATGG TGGAACATTG AAAACAACAG AAACGAGATC TTACCACCTG CTCCCGCTGA
CTTCAAGTTG CCCAAGACAA AGTTCCTCAA GGACTTTATC CAGCTTAACG TCGCCATGAT
GGCTACCAAC AATGCTTTGG TTCCTGACTC TGATAAGCAA GACGACTTGG CTTCTGAGGC
ATGGCAATGG CCTACCTTAA ATGTAGGTAT CAGAATGTGT AGTTGGGCCA AGGATAAGGT
CAAGTACTTC TTGATTGGTT CCACAGTTAA CACCTGGGCT TCTTCTGTAG GTGTGGTTCT
CTTTGCTTTC CTCACTCTCT ACTACTTGAT CAGATGGCAG AGACAGATTG TCGACTTCCC
AGCCAGCGAG CCTAACAAGT TGAAATTGTT CTTGATGGGA GGTATCTACC CAATGTTCGG
CTGGGGTTTA CATTTCATGC CATTCGTCAT TATGGGAAGA GTCACTTACG TCCATCATTA
TGTGCCAGCG CTCTACTTCG CCTTGATTGT GTTGTGCTAC GAAATCGAAA GCTTCACTTC
TCCTTTGAAC AAGGGTGGTT CCGTCAAGAA ATACATCCGT GGTGCCATCT ATATAGCCTG
GTACGCTGCT GTTATTGGTG CTTTCTGGTA CTGGAGATAC ATCTCGTGGG GTTTGGAGGG
TGCTAAGGAA GACTGGAAGC ACTTGGACCT CTTACCAACA TGGAGAATTT CTGACGACAG
ATACCGCTAG GTTTTGCAGT GAAACAATGA TGATGCTACC ATTCATTGTT CTATTATTAT
ATTTGTTAAT TGCAACTGTA ATGGCTGCGA ATAAAATTGG AGATGATGAA GATGCACTCA
TATATATAGG TAAAGACATA GATATGTGTT TGTACAATAC AGGATGATAT CAG
 
Protein sequence
MSASGVYSTD KASLRQRSDK AVAVNGESEL EIDATAEKLA QLDDSSELCA SLAKLEQIVA 
PIFFTAISFF VRFYRISVND AVVWDEAHFG KFGSYYLRHE FYHDVHPPLG KMLIGLSGYL
AGYNGSWDFP SGEKYPDYID YTKMRLFNAT FSALCVPLAY YTGKEIGFSV LTTWLFTLMV
TLELSYVTLG KFILLDSMLL FFTVATVFCF SRFNNYNNAK SEFSRKWWKW ILLTGFSIGC
TCSVKMVGLF VTTLVGIYTV VDLWNKLGDK SISWKKYTQH WLARILALIA IPISIFLLSF
KLHFDLLYKS GTGDANMSSL FQANLVGSDV GGGPREISIA HSVITLKNQG LTGGLLHSHV
QTFPEGSKQQ QVTTYGHKDS NNNWVFQRSR GETPYDTSNN NTEIEYVLDG MKIRVMHPQT
GRNLHTHDIP APVTKGHHEV ACYGNMTIGD LKDNWFVEIV EQQSDEDKLR LHPLTTSFRL
KNEVMNCYLG VTGVSLPQWG FRQGEVACFK NPFKKDKRTW WNIENNRNEI LPPAPADFKL
PKTKFLKDFI QLNVAMMATN NALVPDSDKQ DDLASEAWQW PTLNVGIRMC SWAKDKVKYF
LIGSTVNTWA SSVGVVLFAF LTLYYLIRWQ RQIVDFPASE PNKLKLFLMG GIYPMFGWGL
HFMPFVIMGR VTYVHHYVPA LYFALIVLCY EIESFTSPLN KGGSVKKYIR GAIYIAWYAA
VIGAFWYWRY ISWGLEGAKE DWKHLDLLPT WRISDDRYR