Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67099 |
Symbol | |
ID | 4837020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2343877 |
End bp | 2345126 |
Gene Length | 1250 bp |
Protein Length | 260 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388335 |
Product | hypothetical protein |
Protein accession | XP_001383204 |
Protein GI | 150864410 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000634567 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0803186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TACAACTTCC ATACCTCAAC TGATATCCAT AAGAAAGCAA AGTTCTTGAA AAGTATCCCA AGTCCTTCCA CTTTTCTCTC TTTTCTCTGA TCCAACTTTA GTCGCTCTCT ACAGCATCCT TCTTTTAACT ACAGTCATTC CTTTAATTAA CTATAGTCAC TCCTTTAACT ATTCTTACTT CCTTACAGGA CACTTCTCAA CAATTCAAGA ACTTTAGCAA TGCAATTCTC CAAATTATTC ACGACCCTCG CTGCTGCATC CATTTTTACC ACTGCAATGG CAGCTCCACC AGCAGTCAAG CGTGACGATG ACGACGTTGT TATTGTCAAG GTGAAGACCA CCGTCCAGGA CTATCAAACC AACTACCACA CCGTTGAAGG TCCAGTGCAA ACTAAGACCA ACCTTATTAT TAACACAAGT ACTCTTACTG TAACAAGGTA CACTGCAACA GTGACTTCAA CTGTTTTCGG TACACCACAC ACTTACACTA CAGTTGCTAC TACTCCTGTG CTGCCTGAAG ATGTTGTTCC AAATAGTGAA AATGAAGTTA CAACTCCAGC TGGAACTGAT ACTGAAACTA CCCAGCAACC AGCCCCAGAG CCAACCACTT CCACCACTTC CACCGAAACT ACCCCAACCA CTGAATCAAC ACCTTCTACA CAAACTCCCC CAACTACTCA AACTACTCAA ACTACTAATA CCCCTGAAAC CACCAGCTTA GTACAGCCGG TATCTACATC ACTTGAGGCA GTTGAAACAA CCCCTACCCT CGCTACAAAA ATAGAGGAAA CCACTATTAC CGGTGATCTG AACGACGGCC CAACAATTAC TGCTGGTTCT GTGCCCACTT CAACCGACTC CTGGATCATA GGCAATATTT CCACTGTGAC CTCCAGTGGA GTTTGCTACG TTGACTACGA CTACTACTAT GCTACAGAAA GTGAAGCGGA TGAAACTGTC ACGTCTACCT CTACCATCTA CACGACAGTG ACACAATTAT AAACTAGCGT CTACCCACAG TCAACCCACA GTAAGTAATA CTGCCTACAC CAGTAAAAGT CCTAGAATTT GGTTTCTGTT AATACCTTTA CACCTGTTGA GTTGTCTGAA CAGAGAATGG TTATTCATTC TTTCTGAATA TTTGTATCCT TGGTCCTATT CTTCTACATA ATATATAGTG TCTAGGATAC TCGCAACTCT AATTCTGTTT GTTTTATTTA CATATTTTAA TATAATGGTT ATAACGTCTT
|
Protein sequence | MQFSKLFTTL AAASIFTTAM AAPPAVKRDD DDVVIVKVKT TVQDYQTNYH TVEGPVQTKT NLIINTSTLT VTRYTATVTS TVFGTPHTYT TVATTPVSPE DVVPNSENEV TTPAGTDTET TQQPAPEPTT STTSTETTPT TESTPSTQTP PTTQTTQTTN TPETTSLVQP VSTSLEAVET TPTLATKIEE TTITGDSNDG PTITAGSVPT STDSWIIGNI STVTSSGVCY VDYDYYYATE SEADETVTST STIYTTVTQL
|
| |