Gene PICST_67099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67099 
Symbol 
ID4837020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2343877 
End bp2345126 
Gene Length1250 bp 
Protein Length260 aa 
Translation table12 
GC content42% 
IMG OID640388335 
Producthypothetical protein 
Protein accessionXP_001383204 
Protein GI150864410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000634567 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0803186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TACAACTTCC ATACCTCAAC TGATATCCAT AAGAAAGCAA AGTTCTTGAA AAGTATCCCA 
AGTCCTTCCA CTTTTCTCTC TTTTCTCTGA TCCAACTTTA GTCGCTCTCT ACAGCATCCT
TCTTTTAACT ACAGTCATTC CTTTAATTAA CTATAGTCAC TCCTTTAACT ATTCTTACTT
CCTTACAGGA CACTTCTCAA CAATTCAAGA ACTTTAGCAA TGCAATTCTC CAAATTATTC
ACGACCCTCG CTGCTGCATC CATTTTTACC ACTGCAATGG CAGCTCCACC AGCAGTCAAG
CGTGACGATG ACGACGTTGT TATTGTCAAG GTGAAGACCA CCGTCCAGGA CTATCAAACC
AACTACCACA CCGTTGAAGG TCCAGTGCAA ACTAAGACCA ACCTTATTAT TAACACAAGT
ACTCTTACTG TAACAAGGTA CACTGCAACA GTGACTTCAA CTGTTTTCGG TACACCACAC
ACTTACACTA CAGTTGCTAC TACTCCTGTG CTGCCTGAAG ATGTTGTTCC AAATAGTGAA
AATGAAGTTA CAACTCCAGC TGGAACTGAT ACTGAAACTA CCCAGCAACC AGCCCCAGAG
CCAACCACTT CCACCACTTC CACCGAAACT ACCCCAACCA CTGAATCAAC ACCTTCTACA
CAAACTCCCC CAACTACTCA AACTACTCAA ACTACTAATA CCCCTGAAAC CACCAGCTTA
GTACAGCCGG TATCTACATC ACTTGAGGCA GTTGAAACAA CCCCTACCCT CGCTACAAAA
ATAGAGGAAA CCACTATTAC CGGTGATCTG AACGACGGCC CAACAATTAC TGCTGGTTCT
GTGCCCACTT CAACCGACTC CTGGATCATA GGCAATATTT CCACTGTGAC CTCCAGTGGA
GTTTGCTACG TTGACTACGA CTACTACTAT GCTACAGAAA GTGAAGCGGA TGAAACTGTC
ACGTCTACCT CTACCATCTA CACGACAGTG ACACAATTAT AAACTAGCGT CTACCCACAG
TCAACCCACA GTAAGTAATA CTGCCTACAC CAGTAAAAGT CCTAGAATTT GGTTTCTGTT
AATACCTTTA CACCTGTTGA GTTGTCTGAA CAGAGAATGG TTATTCATTC TTTCTGAATA
TTTGTATCCT TGGTCCTATT CTTCTACATA ATATATAGTG TCTAGGATAC TCGCAACTCT
AATTCTGTTT GTTTTATTTA CATATTTTAA TATAATGGTT ATAACGTCTT
 
Protein sequence
MQFSKLFTTL AAASIFTTAM AAPPAVKRDD DDVVIVKVKT TVQDYQTNYH TVEGPVQTKT 
NLIINTSTLT VTRYTATVTS TVFGTPHTYT TVATTPVSPE DVVPNSENEV TTPAGTDTET
TQQPAPEPTT STTSTETTPT TESTPSTQTP PTTQTTQTTN TPETTSLVQP VSTSLEAVET
TPTLATKIEE TTITGDSNDG PTITAGSVPT STDSWIIGNI STVTSSGVCY VDYDYYYATE
SEADETVTST STIYTTVTQL