| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55476 |
|---|
| Symbol | |
|---|
| ID | 4837059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 84568 |
|---|
| End bp | 86082 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640388374 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382777 |
|---|
| Protein GI | 150864082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000353399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TCAACTATAT CTTACTTGAA CACTTATCTG ACAGCTTTTC CCAGTGATAT TTCTACCATA
GCCAAAATAA ATCAGTACAA AGATTTACAT GCTAATAGAT ACGCAATCCA ACTGATTAAA
GTTGGAATTT TTTACGACAA TAAGGAAACA GCCTATTCTT CCAGAATCAT TGAAACGGTG
CTAGCAGACC CGTTGTCACT GGGAAATGAA ATATGGTTTG AACAGATTGT AACTCGAGAT
AGAGAAGCCA ACAATATCTT CAAGTACTCT GACCAAGTAT CTGTTTCTCA GAATTCCTGT
TATAGTATTC CATCCCCTAT ATTGAGTGGA CAGTATCGAC CTAGTTACGC CAGCATAGAG
TCAGAAACCA GCAGCCCCAC AGCAGTCTTG AACAATATAG AGATCCATGA AGTGAACGAC
TTGGAACAGA TAGATGTAGA GAAGTACCAT TTTATCATAA CTGTGACAAA CGATTTGTCG
AAAACCATAA ATGCAAGTGA TAGTTCCAAC AGAAAGAAAT TGCTCACTGT AATTGACAAT
TCAGAATGGA CTCCATCATC TACCGAAAGC ACTGCAGTGA GTTTCGGCCA GTCCAAGGAC
TTTCATTCAC ATGCCATTAA GATAGATTCT AATGTAGCCT TTCAGGGAAT CAAATTACTC
TTACAAAATG GAGCTAAAGC CGGTGGAGAG TACTTTGATG CCGCAAGAAA AAGTAACATC
TACGAGCTAA ACAAGTCTCT AGGCTACTTT CTGCGCTCAG AAGTCTTGCA GTCCATTTTG
TTGGATGAAA TACGCACTGA CATAAGCAAT GCTCATGTTA GTCAACAGCA CATTGAACAT
ATCAAGGAGT CCCTCAAGAA TGAGATTGCT GCTTTCGGCA ACTCGGTTCA TGGTGAACTT
CAATATGTCT TTAAGCCGGC TACTACAAGT TTCTTCAGGA AGAAGTTATC GTGGTGGAAA
TTGTATATTA AAAACGATAA TGTAGAGTAC GATTTGAAGG ACTACTTTGG CAAAAATTTC
ATGAATAGAA GTGTCGAAGA ATACAACTAT GCCCGAGGCA ATATTGCTGC CAAGATCCAC
CAAGATTACA CCAAGAACAT CACAAACATA GAGAGTAACC CCATCCTAGT GTTAAAGTCT
CAAGTCATGG ACAAGGTAGT CTCAGAAATT CAGCCATTCG TGTACAAAAT TATTGGTTCT
GCGTTTGTAT ATTATCAATT GCCTATCTCA ATAATTTCAT TCTTGTCTTG GCAATATTTC
GACTTTTCTG CTAACAGTGC TGTTGCCTTG TTTCTGCTTG GTTGGATAGT AGGTTTCAAC
CAAGTATCCA AGAATTGGGA AGCATTCACA AATAAATGGC TTATTAATGT TTTTGAACAA
ATCAGAGTTT GTGTTAGCCG TGAATGCATT GACAATGGGC TCTCCAAGGA GTTGAACGAA
GAAGCGGAGC AAGAGATCGC TTTATCTTCG CTTAGAAAGG AAATACTAAC GGGGTTACAA
AATAGAGATA ATTAG
|
|---|
| Protein sequence | STISYLNTYS TAFPSDISTI AKINQYKDLH ANRYAIQSIK VGIFYDNKET AYSSRIIETV
LADPLSSGNE IWFEQIVTRD REANNIFKYS DQVSVSQNSC YSIPSPILSG QYRPKTSSPT
AVLNNIEIHE VNDLEQIDVE KYHFIITVTN DLSKTINASD SSNRKKLLTV IDNSEWTPSS
TESTAVSFGQ SKDFHSHAIK IDSNVAFQGI KLLLQNGAKA GGEYFDAARK SNIYELNKSL
GYFSRSEVLQ SILLDEIRTD ISNAHVSQQH IEHIKESLKN EIAAFGNSVH GELQYVFKPA
TTSFFRKKLS WWKLYIKNDN VEYDLKDYFG KNFMNRSVEE YNYARGNIAA KIHQDYTKNI
TNIESNPILV LKSQVMDKVV SEIQPFVYKI IGSAFVYYQL PISIISFLSW QYFDFSANSA
VALFSLGWIV GFNQVSKNWE AFTNKWLINV FEQIRVCVSR ECIDNGLSKE LNEEAEQEIA
LSSLRKEILT GLQNRDN
|
|---|
| |