Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55030 |
Symbol | PRI1 |
ID | 4837106 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2665669 |
End bp | 2666994 |
Gene Length | 1326 bp |
Protein Length | 437 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388421 |
Product | p48 polypeptide of DNA primase |
Protein accession | XP_001382746 |
Protein GI | 150864059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTTT TCTACAAGAG ACTATTACCT TTCAAGCACA TTTTCCAATG GTTGAGCCAT TCACCCAAGC CAACAAAAGA CTTCACCATG AGAGAATTTG CCTATGAACA TCGTTCTGGA GTTTACCAGA GATATATCTC ATATGACAAT GCTGATGATT TCAAGAACCA TGTAGTCAAC TCCAACCCTA CACGTTTCGA AGTGGGAGCA GTATATTCGG TCAATCCCAA GGAAAGGAAA TTTCTTCCTA AGCTGGCATA CAAACCTGTT TCCAAAGAAT TGGTTTTTGA TATCGATATG ACAGATTACG ATGATATTAG AACTTGTTGC CAGGGAACGG ATATCTGTAC CAAATGCTGG AGATTCATTC AGGTCGCTGC TAAAATCATT GACAGAGCAT TGAGAGAGGA CTTTGGATTC GAGCACTTGA TATGGGTATT CTCGGGGAGA AGAGGGGCAC ATTGTTGGGT GTCTGATCCA AGAGCCAGGA ATTTGGAAGA AGGTACGAGG AGAGCGATTG TAGAGTATAT GGATGTGTTG GGTGCAAAAC AAACCAAGTC TTCCAACAGA AAATTGCTAA ACTTGAAGAA ACCCTTCCAT CCACACGTAG AAAGATCGTT CAATATCGTC AAACAAGAAT TTGCAAAGAT CATCTTGGAA GAACAAGAAC CTTGGTTGAC GACTCCTTCG CTAGCAGATG ACGACAAGGC TTGGACTCAG ACGGAAGAAC TTTTGTCATT CATCCCAGAC AATACATTGC AGTCAGAATT AAGAGCCAAG TGGAAAAACC TGCTTTCATT ATCTACGTCC AGATCTAAGT GGGAAGACAT CAACGTACTT GCAAAGACTT CTTTAAAGTC TCAAGTTCAG GTCAGCCAAT TGAACGAGGC CAAGAAGGAA ATCATATTAT ACTACATGTA CCCAAGACTA GACATAGAAG TGTCGCGTCA AGTTATCCAC TTGTTAAAGT CCCCATTCTG TATCCATCCA GGAACTGGTA ATGTCTGTGT TCCCTTTGAT CCTAGACGCA ATATTTCAAT GAACGCCGAA GATGATGCCT ACGGATTCAA CCCAACCACT GCTCCAAACT TGTTGCAATT GCAGCGTGAA TTGGATATTT GGGAAACTAA GAGGGTGAAT AGAGAGTCTA GCCAACCAGC TGGCGAATCC GGAGATGAAG TAGAAACTAG AGTTCTTGAT TACGAAAAGA CAAGTTTAAA GCCATACGTA GATTACTTTG CGAAATTTGT TCTGGATTTA ACCAAAGCTG AACTTAAAGG TATACTGGCT AAGAGAGATC TTGAAGATAA ACTGTTGGAA TTCTAG
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Protein sequence | MIFFYKRLLP FKHIFQWLSH SPKPTKDFTM REFAYEHRSG VYQRYISYDN ADDFKNHVVN SNPTRFEVGA VYSVNPKERK FLPKSAYKPV SKELVFDIDM TDYDDIRTCC QGTDICTKCW RFIQVAAKII DRALREDFGF EHLIWVFSGR RGAHCWVSDP RARNLEEGTR RAIVEYMDVL GAKQTKKLLN LKKPFHPHVE RSFNIVKQEF AKIILEEQEP WLTTPSLADD DKAWTQTEEL LSFIPDNTLQ SELRAKWKNS LSLSTSRSKW EDINVLAKTS LKSQVQVSQL NEAKKEIILY YMYPRLDIEV SRQVIHLLKS PFCIHPGTGN VCVPFDPRRN ISMNAEDDAY GFNPTTAPNL LQLQRELDIW ETKRVNRESS QPAGESGDEV ETRVLDYEKT SLKPYVDYFA KFVSDLTKAE LKGISAKRDL EDKSLEF
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