| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40758 |
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| Symbol | HST6 |
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| ID | 4836981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2137078 |
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| End bp | 2140671 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640388296 |
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| Product | ATP-dependent permease |
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| Protein accession | XP_001383172 |
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| Protein GI | 150864385 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00433632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.648895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAAGCGTAT TGATGTTCTT CCAGAAATCA GATATCCCCT ACTTCATATT CGCAACCATA
AATGTATGCA TTGCTGCAGC TGCTACCCCT TTGCAAACAT TGGTATATGG TAAAATCTTT
GCCAGGCTTA GCAATTTCTA TTCTGGTCAC TATTCGGATT ATCAAATCTT CATTTCTGAT
GTTCGTCTAC TCTGTTTGCT CATCATGGCT ATAGGCGGTT GTAAGATGCT ATTCACATTC
TTGGGTGTTT CTTGTTGGAT GCAATTTGGA GAAAGACAAC AATTGCGAGC AAGAACAAAA
CTCTACAAAC TAATGCTCTC CAGAAAAATG GAATGGTTTG ACTCTGTCGA TGGTACATCT
GGTCAGATCT CACAGGTTAA TCGTTGTGTT GAAGAATTGA GATCTGGTTC TTCGGAAGTT
ATTGGTTTAT TGGTTCAATC CATTGCTAGT ATTATTGCCT TGCTGATAAC TTCACTCTAT
CATTCCTGGT CATTGACACT AGTTATCATG GCAACATCTC CAATTATGGC CATATTCTCG
TGGTTGTTTG GCAGATTGAC TTACAAGGCT GCAGATCAGG AAAACAGATT GAACGCTCTG
GCCGCCAAAA TATTAGATTG GTGTTTAAGC TGTGCGTCTG TTGTCAGAGT ATTCAATGGA
AAATATGTAG AGCAAGCAAA ATTCAACAGG TTGATCGACA TGTCAGCTGG GGTATACTTC
AAGTTGGCTG CAGCAATGGC TGGCAATTCA GGAATTCTAA GAACATTATC GATAATGATG
TTTGTCCAAG GGTTCTGGTT TGGAAACTAT ATGATTAGTA TTGGAGATCT TGATATAAAT
CAAGTGTTTA CCTGTTTCAC CTCTTGTTTA ATGTTGGGAG CTGCTATATC TGATCTAGCA
AATCTTCTAT CCAGTCTCAA TACCGCAAGA GCTGCAGCTT CAATGATTTC CAAATTTATG
TTGTCACAAG GTGAAGTTCT TGACGAAGAG AGCCATTATT TGCAGCCTGC CATTTGTAAA
GGAAGAATAG AGTTTAAAGA TGTCTGCTTT CATTATCCAG GAAGAGAAGG ACAAGTTCTT
AACAATCTTT CTGCTACAAT TGAGGCTCAA AAATTGACAT TTATCATTGG AAAATCTGGT
TCAGGAAAAT CAACTATTTC GCAACTATTG TTGAAAATGT ATAGCAATAA TGAAGGAACC
ATTTCGATCG ACGGACATGA TATTTCAACC TTGAGCAGAA ATTGGATAAC AGATTCTATT
ACAGTTATTG AACAATCAGT TACAATTTAC AATCAAACAC TCAGGAACAA TTTGGCGGTG
TCGGTTGTTA ATAAATATGG TTCGCTAAAT AGTGTTCCAT TATCGTTGAT ACTGGATGCG
CTTTCTTTTG CCCGTTTGAA TGAAGTCGTA GAAGGACTCG AAGATGGAAT AGACACCACT
ATTTCTTCTT CTACTCTTTC GGGTGGCCAG AAGCAGAGGG TTGCGATAGC TAGAGCAAAA
TTGAGGGACA CTCCAATCCT TATCCTTGAT GAATCATTAT GCGCATTAGA TAACAGATTG
AGAATTCCAT TATTCAACGA AATAAGAGAA TGGAGAAAGG GAAAGACAAC AATTGTAATT
GTTCACGAGC TAGACTATCT AAATGACAAT GACAATGTCA TTGTCTTGGA AAATGGTTCT
GTAAAGTACC ATGGTTTGTT CGAGGAAGTT AGGGATCAAG AGATTATTCT GAGGTTCAAT
GACGAAATTA GTTTTGAATC AAAGACAAGC CTGGTTATAG ACCCAATTCC TAGAAAATCA
GTAGAGTACA ATTACTTGAC CAATCCAGTT ATTCTCAAAG ACTTGGAGAA GAATGTTGGT
TCAAAAATTG CAGATGACAA TTCTGATGAG GTTTATTGTG TTCTTGCAAT ACTAAAGTAT
TGCTTTCATA CTATTGAAAC AAAACCATGG ATAGCAGTTG GATTACTATT CTCTGTCTTC
AGTGGAATTG CTGGTCCCGT ATTCTCCTTT AGTTTCTCCA GGTTACTCTC CAGCATGGTC
GAAGCTTCTG TGGGCATTAA CATCACTCAC AAACTCAAAT TGTGGTCTCT AATTGTTGTA
GGCATTTCTG TTGCTAGTGG CGGGTCTCAT TTTGTATCCA GTTTTATTCT TTCATTCTGT
AGTGAAAAGT GGATATTAAA ACTTCGAAAG CTATGTTTCC AAAAGATCAA TGAACAGGAT
ATGTCTTTTA TTGATTTGGA AAATACTAAG GCTTCTGAAA TTACAGCTTT ACTCATGAAT
GACTCTCGAG ATTTGCGGAA TCTTGTTTCT GAATTTCTCT CTTTGGCTCT CAACCTAGTT
GTCATGGTTC TTGTTGGAGT AACTTGGTCA ATTATTTCAG GTTGGAAGTT GGCTTTGGTT
GGGATATCTT TTGTACCTCT TGTTTTGTCA GTTACAAGAG TATACGGTAT TTTGTTGGAA
CTGTCTGAGA ATTGTTATAA GTCTACGGTT GCAAAATTGG AAAATCACAA TTACGAAACT
CTCACAGCTA TCAGATCCAT AACCATCCTT CGATTACAAA ACTACTTTAA AGAGGAGTTT
GATTGCAATA TTCAACGCAT TAGAAAAAGA GGTACTATAC GAGCACTTCA GACTGGCCTT
GGGCTTGGTC TTACCGAAGG TTGTAACGCC ATAGCAACAG GAACAATCTT GTACTACGGT
ATGGTACTCG CTGGTAAGAA TGAATATACC CAACAACAGC TTTTGCAAGT TATTACGATC
TTGACATTAA CGATGACCAA TGCTGCAGGC CTCATGAACC AACTCCCGGA AATTGCAAGA
GGACAAAGAG CTGGAACTAG AATTATCAAG TTGTTGAATA TGACGCCTTC AGAAGCCGAG
AATGATGGCG ACATCACGAT AAACAGAAAT TTTACCAATC CTTTACTACA ATTTGACAAT
CTTCAATTTG GTTATTCTGG GCAAGAGAAC GTTCTCAAGA ATGTCAGTTT CAATATAGAT
AAGGACGACA TTTGTGCTAT AGTAGGTAAA TCTGGAGGAG GAAAGTCCAC TATTGCTTCT
TTGCTTATGA GACTCTACAA TGCTGGTGAT AGAAGTATAT TTCTATCGAA CTATGACATA
ATGAGGCTAG ATATCGACCA TCTAAGAGAT ACGATTACAA TTGTTCCTCA GAATCCCAGC
TTCTTTGAAG GCACCATCTT CGATAACTTA ACTTACGGTA TCAATCCAAA GAAAAGAGTG
AATATGGATA AGATCTACAA AGTTTTGAAA TACGTCAATA TGTACTCATA TGTACTATCA
TTGCCTGAAG GTGTCCATAC GATAATCGGC GAGGGTTCTC ATTCGCTTCT CTCTGGTGGC
CAGAGCCAGA GGCTCTCAAT AGCCAGAGCA TTAATTAGGG ATCCACAGGT GTTGATCTTG
GACGAGTGTA CATCAAACTT GGATAAGGAA AATACTGACT TTATTATCAA TTTGATCAAC
ACTACTTTAC GAGGCAAAAT GACTATAATT TTGATTACTC ACGATGTTGA GGTAATGAAG
GTTGCTAATA GAATAATAAA GGTCAAGAAT GGTTACATAG TCGAGCAAAG GTAA
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| Protein sequence | KSVLMFFQKS DIPYFIFATI NVCIAAAATP LQTLVYGKIF ARLSNFYSGH YSDYQIFISD
VRLLCLLIMA IGGCKMLFTF LGVSCWMQFG ERQQLRARTK LYKLMLSRKM EWFDSVDGTS
GQISQVNRCV EELRSGSSEV IGLLVQSIAS IIALSITSLY HSWSLTLVIM ATSPIMAIFS
WLFGRLTYKA ADQENRLNAS AAKILDWCLS CASVVRVFNG KYVEQAKFNR LIDMSAGVYF
KLAAAMAGNS GILRTLSIMM FVQGFWFGNY MISIGDLDIN QVFTCFTSCL MLGAAISDLA
NLLSSLNTAR AAASMISKFM LSQGEVLDEE SHYLQPAICK GRIEFKDVCF HYPGREGQVL
NNLSATIEAQ KLTFIIGKSG SGKSTISQLL LKMYSNNEGT ISIDGHDIST LSRNWITDSI
TVIEQSVTIY NQTLRNNLAV SVVNKYGSLN SVPLSLISDA LSFARLNEVV EGLEDGIDTT
ISSSTLSGGQ KQRVAIARAK LRDTPILILD ESLCALDNRL RIPLFNEIRE WRKGKTTIVI
VHELDYLNDN DNVIVLENGS VKYHGLFEEV RDQEIISRFN DEISFESKTS SVIDPIPRKS
VEYNYLTNPV ILKDLEKNVG SKIADDNSDE VYCVLAILKY CFHTIETKPW IAVGLLFSVF
SGIAGPVFSF SFSRLLSSMV EASVGINITH KLKLWSLIVV GISVASGGSH FVSSFILSFC
SEKWILKLRK LCFQKINEQD MSFIDLENTK ASEITALLMN DSRDLRNLVS EFLSLALNLV
VMVLVGVTWS IISGWKLALV GISFVPLVLS VTRVYGILLE SSENCYKSTV AKLENHNYET
LTAIRSITIL RLQNYFKEEF DCNIQRIRKR GTIRALQTGL GLGLTEGCNA IATGTILYYG
MVLAGKNEYT QQQLLQVITI LTLTMTNAAG LMNQLPEIAR GQRAGTRIIK LLNMTPSEAE
NDGDITINRN FTNPLLQFDN LQFGYSGQEN VLKNVSFNID KDDICAIVGK SGGGKSTIAS
LLMRLYNAGD RSIFLSNYDI MRLDIDHLRD TITIVPQNPS FFEGTIFDNL TYGINPKKRV
NMDKIYKVLK YVNMYSYVLS LPEGVHTIIG EGSHSLLSGG QSQRLSIARA LIRDPQVLIL
DECTSNLDKE NTDFIINLIN TTLRGKMTII LITHDVEVMK VANRIIKVKN GYIVEQR
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