Gene PICST_40682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_40682 
SymbolHYS2 
ID4837670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp864132 
End bp865595 
Gene Length1464 bp 
Protein Length487 aa 
Translation table12 
GC content42% 
IMG OID640388985 
ProductDNA polymerase delta small subunit (Hydroxyurea sensitive protein HYS2) 
Protein accessionXP_001382402 
Protein GI150863804 
COG category[L] Replication, recombination and repair 
COG ID[COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.642558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.422149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGT TTACTGATTA CTTCAACAGA GAAGTGACGC CATCGACGGA GTACACAAGA 
ACATCTTTTA AAGATTCTTC CGATTACCCG AAGCAGGAAG AGTTTATCAT TTCTGCTAAA
GACAGAAAGT ATGATAGACA GTATTTTTCC ATGTACCAAT ATCGATTCAA GAATTTGAAA
GAACGAATTA TAGGCAACGC TATTCAAAAA TGGGGCGACG GTACAAAAAG AGTCAACGGA
CAGACAATTG TCAAACAGGA CAAGATTTTG GACATTACCA GCGGGAAGTT GTGTTGGGTT
GTTGGGACTG TGTTCTGTGA TTTGAAGGAC AAGTTGAATA TCTTCCAGGA TGTAGAAAAA
GGAATTGATG ACGTATTGCC ATTAGTTCCT GACTCCTATG TTGGAGATGA TGAAAATTCC
ATGACAACTA TGCTTGAGGA CGAGTCTGGA AGGGCTATTT TGCACAACGA GGAGTTCTTG
AGTAAAAACA TACTAGTTAC TGGATGCATT GTGGGTGTGC TTGGAATCGA GATTCTGGCC
GGAATATTTG AGATTATGGA TATTGTGTAT CCTGAGGCAT CTCCACAGAA GCCGTTGACC
TTGAAAGCTT CCGAAGGGAA GGGTAAAGTA GCGATCGTTT CTGGATTGAA CTTGGAGGAA
GGTGTAGATG CTGATTTGAA GCTTGAGCTC TTGAAGCAGT ATGTTACAGG TAGTTTGGGA
CTGTCTGAAG ATTCCAAGAC TGCTAGCAGT GTCTGTAGGT TGATAATCGC TGGAGATTCT
GTAAAACCCA TAAAAGAGAT GTCCGATCGA AGCAACCGTG ATTTCGTCAC TACCAATAAT
TATGGGTCGA AAAACATCTC ACAATACAAT CCAGAGTCTC TTGTCAAGTT CGATGAGTTT
TTGAGAGAAA TACTTGTCAG TTTACCAGTC TCAGTCATGC CAGGGAACAA CGATATGGGC
GAAATATGTT TACCACAACA GCCTCTTCAT AAGTCGCTAT TCCACAGCAA CGCCAGGTAT
TTGAATGGTG AATACTTAGA ACGATTGACC AACCCATACT GGTTCAATTT TGGCGAATTA
CGTGTGTTAG GCACTTCGGG ACAAAACGTC CATGATATCT TGAAATACTT GTCCAAGAAT
ACAACTGCAG CACCAGAACT CATTTTAAAG ATTATGGAAT CCCATATCAA ATGGCAGAAT
TTTATTCCTA CGGCTCCGGA CACTTTGTAC TGCTATCCGT TTGACAACAG TGATCCGTTT
ACGTTAGTGG ATGAGACTCC ACATGTATAT TTTGTTGGTA ACCAGCAACA ATATGCTAGT
GAAGTATATA CCTACGCTAG TACGACTACA GGAAACAGCG GTTCGGTCCG GTTGGTTAGT
GTACCGAGGT TCAGCGAAAC CGGCGAATTG GTATTGCTTG ATTTGGATAC ATTGGAGACA
GAAGTGGTGC AAATACTGTT GTAG
 
Protein sequence
MVEFTDYFNR EVTPSTEYTR TSFKDSSDYP KQEEFIISAK DRKYDRQYFS MYQYRFKNLK 
ERIIGNAIQK WGDGTKRVNG QTIVKQDKIL DITSGKLCWV VGTVFCDLKD KLNIFQDVEK
GIDDVLPLVP DSYVGDDENS MTTMLEDESG RAILHNEEFL SKNILVTGCI VGVLGIEISA
GIFEIMDIVY PEASPQKPLT LKASEGKGKV AIVSGLNLEE GVDADLKLEL LKQYVTGSLG
SSEDSKTASS VCRLIIAGDS VKPIKEMSDR SNRDFVTTNN YGSKNISQYN PESLVKFDEF
LREILVSLPV SVMPGNNDMG EICLPQQPLH KSLFHSNARY LNGEYLERLT NPYWFNFGEL
RVLGTSGQNV HDILKYLSKN TTAAPELILK IMESHIKWQN FIPTAPDTLY CYPFDNSDPF
TLVDETPHVY FVGNQQQYAS EVYTYASTTT GNSGSVRLVS VPRFSETGEL VLLDLDTLET
EVVQISL