| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40669 |
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| Symbol | BRF1 |
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| ID | 4837324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1365877 |
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| End bp | 1367589 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388639 |
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| Product | Transcription factor IIIB 70 kDa subunit (TFIIIB) (B-related factor) (BRF) |
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| Protein accession | XP_001382483 |
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| Protein GI | 150863862 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.644489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCA AGGTCAAGAA ATGTGCCAAC TGCGGTCACA CTGCCTTCAC ACGTGACCGG
TTCACTAATG CCGGTGATAT ATCGTGCTTG CGATGCGGGA CGGTGATGGA GGAGAATCCT
ATCGTGAGTG AGGTTCAATT CGGCGAATCA TCCTCTGGTG CTGCCATGGT TCAAGGTGCA
ATGGTTGGCG CCGACCAGGC AAGAGCTTCG TACGGGGGAA GACAGAATGC GATGGAAAGT
CGTGAACAGA CATTGTCTAA CGGGAAGAGA AAAATCAGAA AGATCGCTCA TGCCTTGAAG
ATTGCAGACT ATATTGCGGA ATCGGCTGGA GGTTGGTTCA AATTGGCTCT TACCCAGAAT
TTTGTGCAAG GAAGAAGGTC ACAGAATGTG CTAGCAGCCT GTTTGTATGT TGCTTGTAGA
AAAGAGCGTA CTCACCATAT GTTGATAGAT TTCAGTTCAA GATTACAGAT CTCCGTGTAT
TCCTTAGGAG CGACGTTCTT GAAGTTGGTG AAGGCTCTCA ACATTGTAAA ATTGCCGTTA
GCAGATCCTT CTATATTCAT CCAGCATTTT GCCGAAAAGC TTGACTTCAA GGAAAAAGCC
ACCAAAGTGG TCAAAGATGC AGTAAAGTTG GCTCACCAGA TGTCGAGCGA TTGGATTGAC
GCTGGTCGTA GACCTGCTGG TATCGCAGGA GCGTGTGTTC TTTTGGCTGC GAGAATGAAC
AACTTCAGAC GAACCCACTC GGAGATTGTA GCGGTAGCTC ATGTTGCTGA AGAGACATTG
CAGAAACGGT TGAATGAATT CAAGAAGACT GCTTCAGGTG TTTTGACTGT TAGTCAGTTC
CGAGAATCTG AAGGAACCAT ATCGTCGCAG CCTCCTTCCT TTACTAGCAA TCGTGATCGC
GAGGACAAGT TGCGAATCGA AGTGGCAGTC AAAGAAGCCA CGTTAAAGCG ATTCAAAGAA
TATGCTGAAG ATAACCGGTT CAGTGATGAG CCTCCAGACT TCTCCAAAAT CCCCGCAGAT
CCAGAACATA ACAACGCTTC CAAGATGCAA AGACAGCAGC GGTTGTTGCG TCGGGACCAG
TTAGAAAAGG ATACGTTGTT GCGGACGATC TTGAGCGATT GTAGTTTCAC AGTAGATACA
CTCACTGAAG AGTTGGAAAG AATCATCAGC AAGAAGAAGG ACGAATTGAC AGGAGCCTTG
TATATAACTC CTAGTGACTC TAAGGGTGTT GGTCAGAGCG AATTTGCTGA GAAGTGTGAG
ATGAATAAAC CTCGAAATCT CGTGAAAAAC TTACCCAAGA CCCAAGACAT TTTGGCAAAA
GTATCGTCTT CTACTGAGTT GAATCTGGAT GACGACGACG AAGTGGTCTT GGAGAGTGAA
TTGACTCCAG AAGAAGCCTC TATTAAGGAA AGAATATGGA CAGGTTTAAA CCACGACTTT
ATGGTAGCTC AGGAGAGAAA GAGATTGAAA CAGGAGGCTG ATGAGTTGAC AGGGAACACA
TCAGGAACTA CAAGAAAAAA GAGAGCTCGA ACAGCACCAG AAGTTGTTCA AGAGTACGGA
GTCAAGGATG CGTTATCTGT AATTGGAGTC GATGAAAGAA CAGGCGAAGC ACTTACAGCT
GCTGAAAGTG CCAAGATCAT GTTACTGAAG AAGTCGTTTT CTAAGAAGAT CAACTACGAT
CGTATTGATG ACTTGTTTTC GAATAGCATG TAA
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| Protein sequence | MSSKVKKCAN CGHTAFTRDR FTNAGDISCL RCGTVMEENP IVSEVQFGES SSGAAMVQGA
MVGADQARAS YGGRQNAMES REQTLSNGKR KIRKIAHALK IADYIAESAG GWFKLALTQN
FVQGRRSQNV LAACLYVACR KERTHHMLID FSSRLQISVY SLGATFLKLV KALNIVKLPL
ADPSIFIQHF AEKLDFKEKA TKVVKDAVKL AHQMSSDWID AGRRPAGIAG ACVLLAARMN
NFRRTHSEIV AVAHVAEETL QKRLNEFKKT ASGVLTVSQF RESEGTISSQ PPSFTSNRDR
EDKLRIEVAV KEATLKRFKE YAEDNRFSDE PPDFSKIPAD PEHNNASKMQ RQQRLLRRDQ
LEKDTLLRTI LSDCSFTVDT LTEELERIIS KKKDELTGAL YITPSDSKGV GQSEFAEKCE
MNKPRNLVKN LPKTQDILAK VSSSTELNSD DDDEVVLESE LTPEEASIKE RIWTGLNHDF
MVAQERKRLK QEADELTGNT SGTTRKKRAR TAPEVVQEYG VKDALSVIGV DERTGEALTA
AESAKIMLSK KSFSKKINYD RIDDLFSNSM
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