Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40365 |
Symbol | PSP1 |
ID | 4837096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 558749 |
End bp | 559669 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388411 |
Product | phosphoserine phosphatase activity |
Protein accession | XP_001382867 |
Protein GI | 150864153 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.288179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.883376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGG AATACGCTCT TACAGTGATA GCACACGGCT GTGAGTTATC TGCAGAAGAT TTGACAGCCG TAAAGACGTT GTTGACCGAT GTCTTGAAAG TTGGAAAATT CACCTCTCAG GATCTATCCA CCAGAGCTGT AGACTTCTAT TTCCAATCTG CCAAACCAGA AGAACTCCAA CTGGCTGTGA AAAATGAGTT GTTGAACAAT TCTAATCACT ATGATTTGGT TTTCCAGAAA CAATCCACAA GAAAATCCAA GAAGTTGTTC ATCTTCGATA TGGATTCAAC TCTCATCTAC CAGGAAGTCA TCGAGTTGAT CGCAGCCTAT GCTAACATTG AAGATAAAGT AGCAGAAATA ACAGAAAGAG CCATGAATGG CGAACTTGAT TTCAATGCTT CATTGGCTGA AAGAGTGCTG TTGCTCAAGG GAATCGATGC TACGTCTATC TGGGAAGAGT TGAAACACAA GATCGAAGTA ACCAATGGAG CCAAAGAACT CTGTCTTGCG TTAAAGAAAC TTAATGTGGT CATGGGTGTC TGTTCTGGGG GCTTCATTCC TTTGGCTGAA CATGTGAAGC TTCACTTGGG TTTGGACTAT GCCTATGCCA ATGTTCTTGG AACCAACGAG AAGTTGGAGT TAGACGGTAC TACCACCGGC CCAATTGTCA ATGGCGAAAT GAAGGCTGAG CTCCTTCTTA AAATCGCCAA GAACCATGGC ATAGATCCCC AGGATGCGGT CGCTGTAGGT GACGGTGCCA ATGACTTGAA GATGATGTCT GTTGCTGGCT TTGGTGTAGC CTGGAATGCC AAGCCAAAGG TGCAACAGTT GGCCCCTTCG TGTTTGAATT CGGACTCATT ATTGGATATC TTGTACATAT TAGGCTATAC TGAAGCTGAG ATCAAGGAGT TGGTCAACTA G
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Protein sequence | MSEEYALTVI AHGCELSAED LTAVKTLLTD VLKVGKFTSQ DLSTRAVDFY FQSAKPEELQ SAVKNELLNN SNHYDLVFQK QSTRKSKKLF IFDMDSTLIY QEVIELIAAY ANIEDKVAEI TERAMNGELD FNASLAERVS LLKGIDATSI WEELKHKIEV TNGAKELCLA LKKLNVVMGV CSGGFIPLAE HVKLHLGLDY AYANVLGTNE KLELDGTTTG PIVNGEMKAE LLLKIAKNHG IDPQDAVAVG DGANDLKMMS VAGFGVAWNA KPKVQQLAPS CLNSDSLLDI LYILGYTEAE IKELVN
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