| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34848 |
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| Symbol | |
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| ID | 4836761 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 435200 |
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| End bp | 437215 |
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| Gene Length | 2016 bp |
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| Protein Length | 652 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388076 |
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| Product | predicted protein |
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| Protein accession | XP_001382847 |
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| Protein GI | 150864139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00044083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCA GCTCGTTGAG ACATAGCATC GACAAGTTCC ACGAGTATGT CAAACCCGAG
TATGTCAAGA AGGTGAATGA GTCACTATCA GTTTCTCTCA CGTTTATTGA GGATTCGCAG
CCCGATCAGA CTATCCAGGA GTCAACAACA TGTGAATGTT TAATCAGTTT CCACAACGTT
GATGAAAGAG GCATTACTGT CAATGAAACT GATGAGTCAT CATTGCGTCA GACTGAATCA
AACGACTCTG GCTGGTTTGG AGGCTTTTTT GGCACAAACT CAAATAGTTC CGACTCACGA
TTGTTAGTTA ACAGGACGTC TAGTGAGAAT GAGGACTTGA CTATATTTCT TGGATATATC
CAGGTGGTTG GCTATGTAGT GCTTAATTAC AAGTTTGGGC TTAATAGTTC AACTTCGGCC
ATTGATTCTG GCAAAAGTGC CCACTGGTGG GAGAATAAGG ATTACATCTA CAACTATAAA
GATGCCGATG GAGAAGACGG CCAGTATGAA GATGAAAAAG CAGAGAAATT GGACCAAGTA
CCCTATATAA AAGAAAATTT GGCTCATCCA CTAGTTGTTG GTGGAAAATT GGGTGGGGTC
AGTGATTTAA TTGTAGAGCA TGGAAAGTCT TCTAATCACT GGATAGACGA AAAGGCTTTG
TACTACGTCC ACGATCTTTT GTACCCTTTC AATTCTCGGG GACCTCCCAA TTTCAATCAA
AATGCAGATC TTGACGGTAC TGCTGAGATC AAGATACCTG TCAAGGAGTT GTCAGACTCC
ATCATACCAT TCTATTCTAC TTCGCAATCA CTTCTTTTCA CAGACTTACA TATCCCACCA
AAGTCGACAA AGACATTCCA TATTAAGTTC CCCAGATCGA CCGACTTACC TCCCACATAC
AATGCCAGGC TGACCGGACC AGTTTGTGAC CAGGGATTGG TCAGCATCAA GTACTCTCTA
ATTGTAAGTC TTCTGCAAAG TTCTGGATCC AGTATGGATT CGCGTTCCAT TTACTTTCCG
CTTAGCATCA AGGGCGAGAG AATAGGTTCG AACGAGAGAT ACATGCAACG GGACTACTTC
GAATCGAAAA GTAAGATAGA TAAGAATTGG CAAGTAGAGG TCATAGAGGA AGAAGAAGCC
ATAGAACCAC CCGTAGTGGG TAATGTTTCA GAGTCTCTTG AAACCAGAGA GGCATTCTTC
GAAGACATTT CAAAATTGAT CAAATCGGAT TTGTACAATA TGCCAAAAAT GTCCACGAAC
GAGAGAAAGA AGAGTATCCA TTCGTTAGAG TCCTGGGTGG ATGATGTACC TGTAGATGGG
AAATATGTTC CACAGCTTCC GAGCCATTTG AAGACTCAGT TCCAGCTCAG AGTGAACAAT
AATCAGCTTT GCCAAATTAG TTTATCGCGT CCATATTATC ATGTAGGAGA AGACATAAAC
TTCATCTTGG ACATCAACCC CGAAGAACAT AGTCTCTCTA CAAAGGTAGT GGGGTTCATT
GCACATTTGG AAGCTCATGA AATTTTCCAC ACAAACCACT CCAGTGCTCC ACAGGGCAAA
GAGAACTCAG AAGCATTTAC GAATACCTAC CGAGTTTCAG GCAACATCAA GTACAATACA
TTTATGCCCT CCCTTGCAAA TTCCATATTG CCAGATTCAG AACAGAGGCG AACTTTGATC
AATGGATCGA TAAATATACC CAGACATTTA TCCCAGCAAT TCCAGAGCTC CAGTTTCATG
GATCTAAAAT ACTTCATAGT GTTCAAGTTT AATTTGAACC AGTTCTCAGA ATTGCTGGAA
GAGGTTAACG AAGAAGGTAA TGGGACCGAG GCGAACGGAA CCACCGGCCA CAACCCAACT
GAACTTGTAG AAGAATCAGC CGATGTCGAG GCAAGCCTAC TTACTACTTC AAGTATAGTG
CCTACGGATT CTGTACGCAC CAAAATCGAC GCCTTCAGGG CGAATAACTT TGGCACAGAG
TTAAGGTTCA GACTTCCCCT ATACGTACTA CCATAG
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| Protein sequence | MTSSSLRHSI DKFHEYVKPE YVKKVNESLS VSLTFIEDSQ PDQTIQESTT CECLISFHNV
DERGITVNET DESSLRQTES NDSGWFGGFF GTNSNSSDSR LLVNRTSSEN EDLTIFLGYI
QVVGYVVLNY KFGLNSSTSA IDSGKSAHWW ENKDYIYNYK DADGEDGQYE DEKAEKLDQV
PYIKENLAHP LVVGGKLGGV SDLIVEHGKS SNHWIDEKAL YYVHDLLYPF NSRGPPNFNQ
NADLDGTAEI KIPVKELSDS IIPFYSTSQS LLFTDLHIPP KSTKTFHIKF PRSTDLPPTY
NARSTGPVCD QGLVSIKYSL IVSLSQSSGS SMDSRSIYFP LSIKGERIGS NERYMQRDYF
ESKSKIDKNW QVEVIEEEEA IEPPVVGNVS ESLETREAFF EDISKLIKSD LYNMPKMSTN
ERKKSIHSLE SWVDDVPVDG KYVPQLPSHL KTQFQLRVNN NQLCQISLSR PYYHVGEDIN
FILDINPEEH SLSTKVVGFI AHLEAHEIFH TNHSSAPQGK ENSEAFTNTY RVSGNIKYNT
FMPSLANSIL PDSEQRRTLI NGSINIPRHL SQQFQSSSFM DLKYFIVFKF NLNQFSELSE
EVNEEESADV EASLLTTSSI VPTDSVRTKI DAFRANNFGT ELRFRLPLYV LP
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