| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30161 |
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| Symbol | |
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| ID | 4837264 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2104136 |
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| End bp | 2105467 |
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| Gene Length | 1332 bp |
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| Protein Length | 379 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388579 |
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| Product | predicted protein |
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| Protein accession | XP_001382630 |
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| Protein GI | 150863969 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCTA AAGTGTAAGT TCGTGTTTAA TTTAAGTACT GGGCAGTAGA AATGCCGCAA
TTGTGTAACT GATACGAGAA GATGGTCTCC ATATTCTATA TTTCACGCCT CTGCAAGTTT
TCTGAAGTGA AAGCTTCTCT ATGAAAATGC ATTGTATTCT TGCGTTCAGT TTTCCTCTTC
TCTTGTACAT ACTAACAGGT TTCAAGTAAA ACTGAGGTAG CCAAAGCTGT CAAGGAAACT
GTCAAAAAGA CGGTCAGAGC CAAAAAGGTT AAGAAGGTCG AGTTCAAGTA TGAAAGACTG
ACTACGAGCA AATTCAAATT TGGAGCTCAC GTAGGTGCAT CTGGTGGAGT TTCAAATTCC
GTCATCAATG CCAGAAACCT TGGTGCTAAC AGTTTTGCCT TGTTTTTGAA GTCTCCTAGG
AAATGGGTGA GTCCCCCCAT CTCTGCTGAA GAAATTGACA AATTCAAGCT GTTGTGCGAA
GAACACGGAT ATGATCCCAG AACCGACGTT TTACCTCATG GATCGTATTT CATTAACTTA
GCCAATCCAG ACCCTGAAAA GGAGGAAAAA GCGTTTGACG GATTTCTAGA TGATTTGCAC
AGATGTGAAC AATTGAACAT TGGATTATAT AACTTTCATC CAGGCTCGAG TTTAGACGGG
GACCATAGGG AAGCTCTTGA GAGGTTGGCC AAAAACATCA ACAGGGCTAT TAAAGAAACA
AGCTTTGTCA AAATCGTGAT TGAAAATATG GCTGGCCACG GTAACTTGAT CGGATCCAAT
CTACAAGATA TCAGAGACGT CATAGACATC GTAGAGGACA AGCTGAGAGT CGGAGTTTGC
GTCGACACTT GCCACACATT TGCTGCTGGG TACGATATTT CGACTGAGGA GAAGTTTGAA
GCGTTCTGGA AGGAGTTTGA CAACATTGTG GGTGCCGAAT TCTTGAGTGC CATCCATTTG
AATGACTCCA AAGCTCCTTT GGGTGCCAAC AGAGATTTAC ACCAATTCTT GGGACAAGGA
TTTTTGGGCT TGGAAGCATT CAGAGTCGTG GCTAACTCGC CCAGATTGCA CAATATTCCC
ATCATCTTGG AAACCCCCGT AGGTAACGAC GATAGTTACT ATGGAGAAGA GATTAAACTC
TTGGAACTAT TAGAGGATAA AACCATTGAC GACACGGAGT TTGTAGAGAA GAAAGAAAAG
CTCTCGAAGT TGGGAGCAAA AGAGAGATCC GAGCATGAGA AGAAGTTCGA GACCAAGAAG
GCTAAGACGG CTAAGAAGAC TGCTGGTGAT GATATCGCTT CGTTGGTTAC AAAGAGACCC
AAAAGGAAGT AG
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| Protein sequence | MPPKVKTEVA KAVKETVKKT VRAKKVKKVE FKYERSTTSK FKFGAHVGAS GGVSNSVINA
RNLGANSFAL FLKSPRKWVS PPISAEEIDK FKSLCEEHGY DPRTDVLPHG SYFINLANPD
PEKEEKAFDG FLDDLHRCEQ LNIGLYNFHP GSSLDGDHRE ALERLAKNIN RAIKETSFVK
IVIENMAGHG NLIGSNLQDI RDVIDIVEDK SRVGVCVDTC HTFAAGYDIS TEEKFEAFWK
EFDNIVGAEF LSAIHLNDSK APLGANRDLH QFLGQGFLGL EAFRVVANSP RLHNIPIILE
TPVGNDDSYY GEEIKLLELL EDKTIDDTEF VEKKEKLSKL GAKERSEHEK KFETKKAKTA
KKTAGDDIAS LVTKRPKRK
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