Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30104 |
Symbol | |
ID | 4837142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1945960 |
End bp | 1948698 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388457 |
Product | predicted protein |
Protein accession | XP_001382603 |
Protein GI | 150863948 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5059] Kinesin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0136472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC CCAATTCGCT CGTTCCCACC CGGCCAGCTT CTGGTCTGAA GACTCGTGAA TCATCCATCA CTGTAGCAGT GCGAGTTCGT CCCTTCACAG ACAACGAAGA AAACAACCTC ATTCGAAGCA CCAACGACGG CTTTTTTCTC GGAGATGGCT CCTTCAGCAG CAACGCCCCG AATCAGGAAA CTTCCCGAGC CTCAGTGTTT GCTCCCAAGG GAATCCGTAA AATCGTAGAA GTCGTTGATG ACAAGATGTT GATCTTTGAT CCACCAGAAA CCAACCCTCT AACGAGAATG CAGAAAAATG CTTTTCCTAA CAGCCTTAAG GGCTCGAGAA TTAGAGAGCA TCGTTTTGTG TTCGACAGAC TCTTCGATGT AGATGCTACC CAGGAAGATG TTTACCAGAA CACGACTCGG CCTCTTCTAG ATAGTGTTCT AGATGGCTTC AACGCTACGG TCTTTGCCTA TGGTGCTACG GGATGTGGCA AAACTCATAC TATTCTGGGC TCTCCACAGA AACCAGGAGT CATTTTCTTA ACTATGAAAG AGTTATTTGA TCGTATAGAC CTGTTGGCAG ATACTAAGAT CATCGATATC AGCTTGTCAT ATTTGGAGAT CTACAACGAG ACCATTAGAG ACTTGTTGAA CCCAGAAACA GATCACAAGA AATTGGTTCT ACGAGAAGAC TCAAACAAGA AGATCTCCGT GTCAAACTTG CTGACTCATA AACCCTCTGC AGTAGAAGAA GTAATGGACC TCATCCTTGT AGGAAATCTG AACAGAACCT CGTCTCCAAC TGAAGCCAAT GCTACTTCTT CACGATCCCA CGCAGTTCTC CAAATAAACG TGGTTCAGAA AAACAAAACA GCAGACATAA CAGAAGAACA CACTTTTGCT ACTCTTTCCA TAATAGACTT GGCTGGAAGC GAACGAGCTG CAGCGACAAA GAATATCGGT GTTAGATTGA ATGAAGGTGC CAACATCAAC AAATCTCTAT TGGCATTGGG AAACTGTATT AATGCTCTCT GTGATACAAG AAGACGAAAT CATGTACCTT ATCGTGATTC CAAATTGACA AGGTTGTTAA AGTTTTCTCT AGGAGGAAAC TGCAAAACTG TAATGATCGT ATGTATATCG CCTCTGTCCC AACATTACGA TGAGACGTTG AATACCTTGA AATATGCCGA CCGCGCAAAG GAGATCAAAA CCAAACTCAT CAGGAACCAA CACAATCTAG ACAGACACGT TGGTTCCTAC TTAAAGATGA TTACAGAACA GAAACAGGAA ATTGAAGAGC TAAGAGCACG AGAAAACAAA ATCGTGGAAC AGACTATAAA CAAGCAGAAA ACAGTTGGGG ACAAATGTCT CCATCTTCTC TTGGAAAGCA TAGACAACAT CGAAAGTTCT TTGACGAAAC AGAACCAGGA AAAATGGAAA AAGTATTTCA TCCTCGCAAA GAGAAAGTTA CTACTATTAC AGAGAATTGA AACAGAAATA ATTTTCGATA GCATTCTCAA TTTGTTGAAG AACGATGACA TTGCTGTTGT CAACACGCTT GCTGATCTTT GCGAACAGCT CATATCGAAG ATTGACTACC AAGTACCAGA ATTGGAGCGA CAATATTCGC AGCCAAATGA AATAGATCTC ATATTGGTTG AATCTACCCA GCAAATATTA AAAAAGCTAA AGGAAAACGA AGGCTGGTCT GAATACTACA CCATTATATT TGAAAAACAC ATAGGTCAAT TAAGAGAATC GTTTGAAAGA GATGTACTTT TCAACTCATC AATCTTGTTT GACCATCTTG TACATGAATT GAATGACTTT AACTACATTG CCAGAGATTT TGTTAATGCA TTGGTCGTTG GTTTTAGAAA GGGACCAGAC GTCGTGGATG AGAATATGGA TTTGGTTGAA CAAGTAATCG GATCTCTAGA GCAGTTATTG AATGGAGAGT TCGATACTGC TATGGAGAAA TGCACATCTG CATTCATGCA AAGAAAGATA GAGGAACAAG AAAAACAACA GGAATTGTCA CAACATAATT CCACAGATTT TGAATCTCTA TCTAAGAACA GCATCTTGTC CAAACCTAGA GAGAACAAGA GGGGTCCACT ATCGCCTTTG AAGTCATCAC CATCTAGAAG CATCAAACGT ACTATATCGA AGAAACCGAT AACTCCACGA TTCTCACCTA TCAGAGCAAA GAATACAAAG AAAGTTAGAT GGGATATACC TAAATCCGAT AGTACCTTTG ATTTGAGCAT GGATGAATCA TTACAGAACG CAACTTTCAA AAGCGATCTA GACGACTCCC CTATAACTAA TAATAATGGC ACCCAGAACA TCCTCAGCGA CGACTTGGGA ATATCATTCG ATCCATCACT TGATTCTCCC CCACTTGCTT ATTCTAGTGG CAAGAAATTA CTTAGCGACT TATCCACAAC GAAGAATAAA AAGTCTACAT TCAGTAATCG TCGCTTGTCA ATAAACCTTA GCTCACAATC AATTGATGGT TCTGGCACCA CCGTTTCAAA ATTGCCATTG CTTAACAAGC ATGCCAGCAT TAAAATGACC AACACCAATG GTGCTTCTTT AATTCCGAAC CCTACTTCTC CTAATCAATT GGGAATAGGT ATACCTTTTG TTGTTGACGC CAACAAATTT CATGTAGTTG ATGTTGGTAA CGGTGATCGA GATATTGGAT CCAGCAGCAC TGTTGAACGA GTAGATTAA
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Protein sequence | MNDPNSLVPT RPASGSKTRE SSITVAVRVR PFTDNEENNL IRSTNDGFFL GDGSFSSNAP NQETSRASVF APKGIRKIVE VVDDKMLIFD PPETNPLTRM QKNAFPNSLK GSRIREHRFV FDRLFDVDAT QEDVYQNTTR PLLDSVLDGF NATVFAYGAT GCGKTHTISG SPQKPGVIFL TMKELFDRID SLADTKIIDI SLSYLEIYNE TIRDLLNPET DHKKLVLRED SNKKISVSNL STHKPSAVEE VMDLILVGNS NRTSSPTEAN ATSSRSHAVL QINVVQKNKT ADITEEHTFA TLSIIDLAGS ERAAATKNIG VRLNEGANIN KSLLALGNCI NALCDTRRRN HVPYRDSKLT RLLKFSLGGN CKTVMIVCIS PSSQHYDETL NTLKYADRAK EIKTKLIRNQ HNLDRHVGSY LKMITEQKQE IEELRARENK IVEQTINKQK TVGDKCLHLL LESIDNIESS LTKQNQEKWK KYFILAKRKL LLLQRIETEI IFDSILNLLK NDDIAVVNTL ADLCEQLISK IDYQVPELER QYSQPNEIDL ILVESTQQIL KKLKENEGWS EYYTIIFEKH IGQLRESFER DVLFNSSILF DHLVHELNDF NYIARDFVNA LVVGFRKGPD VVDENMDLVE QVIGSLEQLL NGEFDTAMEK CTSAFMQRKI EEQEKQQELS QHNSTDFESL SKNSILSKPR ENKRGPLSPL KSSPSRSIKR TISKKPITPR FSPIRAKNTK KVRWDIPKSD STFDLSMDES LQNATFKSDL DDSPITNNNG TQNILSDDLG ISFDPSLDSP PLAYSSGKKL LSDLSTTKNK KSTFSNRRLS INLSSQSIDG SGTTVSKLPL LNKHASIKMT NTNGASLIPN PTSPNQLGIG IPFVVDANKF HVVDVGNGDR DIGSSSTVER VD
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