Gene PICST_30104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30104 
Symbol 
ID4837142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1945960 
End bp1948698 
Gene Length2739 bp 
Protein Length912 aa 
Translation table12 
GC content41% 
IMG OID640388457 
Productpredicted protein 
Protein accessionXP_001382603 
Protein GI150863948 
COG category[Z] Cytoskeleton 
COG ID[COG5059] Kinesin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0136472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC CCAATTCGCT CGTTCCCACC CGGCCAGCTT CTGGTCTGAA GACTCGTGAA 
TCATCCATCA CTGTAGCAGT GCGAGTTCGT CCCTTCACAG ACAACGAAGA AAACAACCTC
ATTCGAAGCA CCAACGACGG CTTTTTTCTC GGAGATGGCT CCTTCAGCAG CAACGCCCCG
AATCAGGAAA CTTCCCGAGC CTCAGTGTTT GCTCCCAAGG GAATCCGTAA AATCGTAGAA
GTCGTTGATG ACAAGATGTT GATCTTTGAT CCACCAGAAA CCAACCCTCT AACGAGAATG
CAGAAAAATG CTTTTCCTAA CAGCCTTAAG GGCTCGAGAA TTAGAGAGCA TCGTTTTGTG
TTCGACAGAC TCTTCGATGT AGATGCTACC CAGGAAGATG TTTACCAGAA CACGACTCGG
CCTCTTCTAG ATAGTGTTCT AGATGGCTTC AACGCTACGG TCTTTGCCTA TGGTGCTACG
GGATGTGGCA AAACTCATAC TATTCTGGGC TCTCCACAGA AACCAGGAGT CATTTTCTTA
ACTATGAAAG AGTTATTTGA TCGTATAGAC CTGTTGGCAG ATACTAAGAT CATCGATATC
AGCTTGTCAT ATTTGGAGAT CTACAACGAG ACCATTAGAG ACTTGTTGAA CCCAGAAACA
GATCACAAGA AATTGGTTCT ACGAGAAGAC TCAAACAAGA AGATCTCCGT GTCAAACTTG
CTGACTCATA AACCCTCTGC AGTAGAAGAA GTAATGGACC TCATCCTTGT AGGAAATCTG
AACAGAACCT CGTCTCCAAC TGAAGCCAAT GCTACTTCTT CACGATCCCA CGCAGTTCTC
CAAATAAACG TGGTTCAGAA AAACAAAACA GCAGACATAA CAGAAGAACA CACTTTTGCT
ACTCTTTCCA TAATAGACTT GGCTGGAAGC GAACGAGCTG CAGCGACAAA GAATATCGGT
GTTAGATTGA ATGAAGGTGC CAACATCAAC AAATCTCTAT TGGCATTGGG AAACTGTATT
AATGCTCTCT GTGATACAAG AAGACGAAAT CATGTACCTT ATCGTGATTC CAAATTGACA
AGGTTGTTAA AGTTTTCTCT AGGAGGAAAC TGCAAAACTG TAATGATCGT ATGTATATCG
CCTCTGTCCC AACATTACGA TGAGACGTTG AATACCTTGA AATATGCCGA CCGCGCAAAG
GAGATCAAAA CCAAACTCAT CAGGAACCAA CACAATCTAG ACAGACACGT TGGTTCCTAC
TTAAAGATGA TTACAGAACA GAAACAGGAA ATTGAAGAGC TAAGAGCACG AGAAAACAAA
ATCGTGGAAC AGACTATAAA CAAGCAGAAA ACAGTTGGGG ACAAATGTCT CCATCTTCTC
TTGGAAAGCA TAGACAACAT CGAAAGTTCT TTGACGAAAC AGAACCAGGA AAAATGGAAA
AAGTATTTCA TCCTCGCAAA GAGAAAGTTA CTACTATTAC AGAGAATTGA AACAGAAATA
ATTTTCGATA GCATTCTCAA TTTGTTGAAG AACGATGACA TTGCTGTTGT CAACACGCTT
GCTGATCTTT GCGAACAGCT CATATCGAAG ATTGACTACC AAGTACCAGA ATTGGAGCGA
CAATATTCGC AGCCAAATGA AATAGATCTC ATATTGGTTG AATCTACCCA GCAAATATTA
AAAAAGCTAA AGGAAAACGA AGGCTGGTCT GAATACTACA CCATTATATT TGAAAAACAC
ATAGGTCAAT TAAGAGAATC GTTTGAAAGA GATGTACTTT TCAACTCATC AATCTTGTTT
GACCATCTTG TACATGAATT GAATGACTTT AACTACATTG CCAGAGATTT TGTTAATGCA
TTGGTCGTTG GTTTTAGAAA GGGACCAGAC GTCGTGGATG AGAATATGGA TTTGGTTGAA
CAAGTAATCG GATCTCTAGA GCAGTTATTG AATGGAGAGT TCGATACTGC TATGGAGAAA
TGCACATCTG CATTCATGCA AAGAAAGATA GAGGAACAAG AAAAACAACA GGAATTGTCA
CAACATAATT CCACAGATTT TGAATCTCTA TCTAAGAACA GCATCTTGTC CAAACCTAGA
GAGAACAAGA GGGGTCCACT ATCGCCTTTG AAGTCATCAC CATCTAGAAG CATCAAACGT
ACTATATCGA AGAAACCGAT AACTCCACGA TTCTCACCTA TCAGAGCAAA GAATACAAAG
AAAGTTAGAT GGGATATACC TAAATCCGAT AGTACCTTTG ATTTGAGCAT GGATGAATCA
TTACAGAACG CAACTTTCAA AAGCGATCTA GACGACTCCC CTATAACTAA TAATAATGGC
ACCCAGAACA TCCTCAGCGA CGACTTGGGA ATATCATTCG ATCCATCACT TGATTCTCCC
CCACTTGCTT ATTCTAGTGG CAAGAAATTA CTTAGCGACT TATCCACAAC GAAGAATAAA
AAGTCTACAT TCAGTAATCG TCGCTTGTCA ATAAACCTTA GCTCACAATC AATTGATGGT
TCTGGCACCA CCGTTTCAAA ATTGCCATTG CTTAACAAGC ATGCCAGCAT TAAAATGACC
AACACCAATG GTGCTTCTTT AATTCCGAAC CCTACTTCTC CTAATCAATT GGGAATAGGT
ATACCTTTTG TTGTTGACGC CAACAAATTT CATGTAGTTG ATGTTGGTAA CGGTGATCGA
GATATTGGAT CCAGCAGCAC TGTTGAACGA GTAGATTAA
 
Protein sequence
MNDPNSLVPT RPASGSKTRE SSITVAVRVR PFTDNEENNL IRSTNDGFFL GDGSFSSNAP 
NQETSRASVF APKGIRKIVE VVDDKMLIFD PPETNPLTRM QKNAFPNSLK GSRIREHRFV
FDRLFDVDAT QEDVYQNTTR PLLDSVLDGF NATVFAYGAT GCGKTHTISG SPQKPGVIFL
TMKELFDRID SLADTKIIDI SLSYLEIYNE TIRDLLNPET DHKKLVLRED SNKKISVSNL
STHKPSAVEE VMDLILVGNS NRTSSPTEAN ATSSRSHAVL QINVVQKNKT ADITEEHTFA
TLSIIDLAGS ERAAATKNIG VRLNEGANIN KSLLALGNCI NALCDTRRRN HVPYRDSKLT
RLLKFSLGGN CKTVMIVCIS PSSQHYDETL NTLKYADRAK EIKTKLIRNQ HNLDRHVGSY
LKMITEQKQE IEELRARENK IVEQTINKQK TVGDKCLHLL LESIDNIESS LTKQNQEKWK
KYFILAKRKL LLLQRIETEI IFDSILNLLK NDDIAVVNTL ADLCEQLISK IDYQVPELER
QYSQPNEIDL ILVESTQQIL KKLKENEGWS EYYTIIFEKH IGQLRESFER DVLFNSSILF
DHLVHELNDF NYIARDFVNA LVVGFRKGPD VVDENMDLVE QVIGSLEQLL NGEFDTAMEK
CTSAFMQRKI EEQEKQQELS QHNSTDFESL SKNSILSKPR ENKRGPLSPL KSSPSRSIKR
TISKKPITPR FSPIRAKNTK KVRWDIPKSD STFDLSMDES LQNATFKSDL DDSPITNNNG
TQNILSDDLG ISFDPSLDSP PLAYSSGKKL LSDLSTTKNK KSTFSNRRLS INLSSQSIDG
SGTTVSKLPL LNKHASIKMT NTNGASLIPN PTSPNQLGIG IPFVVDANKF HVVDVGNGDR
DIGSSSTVER VD