| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30036 |
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| Symbol | LAC4 |
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| ID | 4837088 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1783793 |
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| End bp | 1786915 |
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| Gene Length | 3123 bp |
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| Protein Length | 1021 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388403 |
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| Product | Beta-galactosidase (Lactase) |
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| Protein accession | XP_001382569 |
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| Protein GI | 150863923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0855272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGACT ATACAAAGAA TTCGCTAGTA AAAGTACTTT CAGATCCACA GACTGTTCAT
ACCAACAGAT TACCAACAAG GGCATACTAC CTCCCGTCTG AATCGACTTT GTCTTTGAAT
GGAGACTGGG ATTTTAGTTA TTTCGAAACT CCTCAGGAAG CCCCAATACC AGGAGACAAT
TTCGAAGACT TTAAAAAGAT TCGAGTTCCT GGCCATTGGC AATTACAAGG ATACGGAAGA
CCTCATTACA CCAACGTCGT CTATCCATTC CCTGTAACAC CCCCAAATCC ACCTTCGAAA
AATCCAACTG GGGTTTATCG CCATTCATTT GAAGTTCCAG AAGATTGGTC AAAAAAAGAT
TATGAATACA GACTCCGGTT CGAAGGAGTC GACAACTCAT ATCACTTATT TCTCAATGGT
AAACTCATTG GATACAACGA AGGAAGTAGA AATGCTGCTG AATTCGATGT ATCCGACTGC
ATCCACAAAA CAGGCAAGAA TGACTTGGTC ATTAGAGTTT ATCAATGGTC TAGCTCATCT
TACATTGAAG ATCAGGACCA ATGGTGGTTA AGTGGAATAT TTAGAGATGT CTACTTACTA
GGATTCAATA AGAAGGGCTA TATCAAGAAC TTTCAAGTTG CTACTGATTT GGACAAAGAG
TACAAGAATG CCGAATTGAG AATTAACTTG CAATTGAACA CTACTTCAGA TGTAAAGATA
TCTTTGCATG ACCCCACAAA GAATTTGATA TTTGAACAGA AGTTTGACAA ATTGGTTCCA
TCTTCTGAAC TCAAATTTCC AGTTTCAGAG CCTTTGAAAT GGACAGCGGA GTCGCCTTAC
TTGTACCTTC TTCGAATTGA GATTGTCGAC GAATTAGAGG CAAAGATTTC TTGTGTTGAA
CAACAGATCG GGTTCAGAAC AGTAGAAATG AAGAAAGGCT TGATCTGCGT CAATGGAGTT
CCAATTTTGA TAAGAGGAGT TAATAGACAT GAACACCATC CAAAGTTTGG CAGATCAGTT
CCTTTTGACT TTGTAGAAAG AGACTTAAAA CTTATGAAAG CTCACAATAT CAACGCCATT
AGAACTGCTC ATTACCCAAA TCATCCCAAG TTTTATGAAT TGGCAAATCA GCTAGGATTT
TGGGTTTTAG ACGAAGCCGA CTTAGAATGT CATGGATTCG TCGAAGCTGT ACGTATTCCA
CAGAATAAGG AGACACAAAT TCTGTACGAC GAAACCACTC GTCAACTATT CAAAGAAGCA
GCGGAATTCA CATCAAATAA CCCGTTATGG GAGAATGCTT ATATAGACCG TGCAAATCAA
TTGGTGCATA GAGATTGTAA TCAACCCTGC ATCATCATAT GGTCTCTAGG AAATGAAGCA
TTTTTCGGAC GGAATCATGC TAAAATGGCG AAAGAAATCA GGAGAAATGA TATTCAGAAC
AGACCAATTC ATTACGAAGG AGATTTGAAC GCTGAAGTTG CCGACATGTT TAGTAGAATG
TACATCACTC CTGATGAAGT TCTTGAGTAT ACTAAGCAGA AAGCAAAACC CTTGATTCTA
TGTGAATATG CTCATGCAAT GGGAAATGGA CCCGGACTTT TAAGACAATA CCAGGACTTA
TTCTATGAGC ATGAAATTCT TCAAGGAGGA TTTGTCTGGG AATGGGCAAA CCACGGATTG
GAAGATGTTG ATTCCAAAGG AAATGTAGTA TATAAATACG GCGGTGACTT CGGCGAGTCT
CCTCACGACG GTGTTTTTAT TTTGGACGGA CTTACGAATT CTGTCCATGA CCCAACTCCT
GGATTGGTGG AATATAAGAA GGTGATCGAG CCTGTAGTTA TTTTAATTGG AGAAGAAGAA
GTTTCCATCA AGAATACTTT TGATTTCATC GACTTGAATG AGTACACGGC TGAATACACA
TTTCTCGAAA TCATTGGATT AGATAGACAT GTTTTGCAAT CCGGAGATTT AGACATCTCT
AATTTGCAGC CCAAACAAAC AAGAAAACTA GCACTCCCAA CTTTGGAATC CAAACCTGAG
CCTGGGTCCA CTGTTATATT TCATATCATT ATCAAAACAA AGAAAGAAAC TCGCGGTTTA
CGTCGAGACC ATATTATCTC TTGGGCACAG AGAAAGATAC AACAGGGAAG CTCCAAAATT
CTCAAGCAAC CTGGTGCAAC TTTAAAATGC AAACAAGAAG GGAACAGTTT GCAGATCGAT
TCCGAAGGAT CCAAGTTGGT GTTTGATTTG GTTAAAGGGA GAATTAATTA TTGGGGATCA
AGCAAAGAAC TTTTCTTGAG CGATGAAATG GACCAAGGAA GTTTGACATT CTGGAGACCA
AGCATCAATA ATGATGCTAC CAAAGATGCA CCATACTGGA AATCATTTGG CTTGGACAAG
ATGCAAAACC ATGTTCGTGA TGTTAGAGTT CAAAAACAAA ACCAATTTCA AGTAACCATC
GAAGTAGATT CCTTTGTGGC TCCTCCTATA TTAGCCTGGG GATTTGAAGT GAAACAGGTT
TACGAAGTGC TTGACAAAAA GATCAAATTA ACCACTTCTT TGAAGCCAAT TGGCCACAAG
GATGAGTTCA TTCCCAAGAC AATTCCTCGT CTAGGTTATC AGTTCATTAT TTCTGACAAA
CTAGGATCTA ACGTGAGATG GTTTGGGCGA GGTCCTGGAG AAAGCTATAG TGACAAAAAG
GAAGGACAAT GGTTCGATGT TCATAGACTT CCGCTTGACA AATTGGATTA CAGCTACGAT
TACCCACAAG AAAACGGAAA CCATGAAGAT ACCGATTGGG TTCTTCTTGA ATCAAAAGAA
GAAGTCAAAG GCACACAAGC AGAAAATGGA GCTAAGAGTG AGTGTGGTGC AGCCCCAAAT
GTGTCTAATG CAGTGTTAAT TAGCTCATCT AGAGCTTTCG GATTCAAGGC GTCGGATAGC
TGGCGAGTAG ACGAGGCACA GCATCCATCT GACATAGTTC ATGATAGACG GTTTATTCGG
TTAGACTACA AGCAACATGG AGTTGGAACC GAGGCTTGTG GTCCTGGTCC ATTAGCCGAA
TATCAATTTA GACTTAACGG TCCAATAGAG TTCGAGTTCA CACTAGACAT GATAACGAAC
TAG
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| Protein sequence | MIDYTKNSLV KVLSDPQTVH TNRLPTRAYY LPSESTLSLN GDWDFSYFET PQEAPIPGDN
FEDFKKIRVP GHWQLQGYGR PHYTNVVYPF PVTPPNPPSK NPTGVYRHSF EVPEDWSKKD
YEYRLRFEGV DNSYHLFLNG KLIGYNEGSR NAAEFDVSDC IHKTGKNDLV IRVYQWSSSS
YIEDQDQWWL SGIFRDVYLL GFNKKGYIKN FQVATDLDKE YKNAELRINL QLNTTSDVKI
SLHDPTKNLI FEQKFDKLVP SSELKFPVSE PLKWTAESPY LYLLRIEIVD ELEAKISCVE
QQIGFRTVEM KKGLICVNGV PILIRGVNRH EHHPKFGRSV PFDFVERDLK LMKAHNINAI
RTAHYPNHPK FYELANQLGF WVLDEADLEC HGFVEAVRIP QNKETQISYD ETTRQLFKEA
AEFTSNNPLW ENAYIDRANQ LVHRDCNQPC IIIWSLGNEA FFGRNHAKMA KEIRRNDIQN
RPIHYEGDLN AEVADMFSRM YITPDEVLEY TKQKAKPLIL CEYAHAMGNG PGLLRQYQDL
FYEHEILQGG FVWEWANHGL EDVDSKGNVV YKYGGDFGES PHDGVFILDG LTNSVHDPTP
GLVEYKKVIE PVVILIGEEE VSIKNTFDFI DLNEYTAEYT FLEIIGLDRH VLQSGDLDIS
NLQPKQTRKL ALPTLESKPE PGSTVIFHII IKTKKETRGL RRDHIISWAQ RKIQQGSSKI
LKQPGATLKC KQEGNSLQID SEGSKLVFDL VKGRINYWGS SKELFLSDEM DQGSLTFWRP
SINNDATKDA PYWKSFGLDK MQNHVRDVRV QKQNQFQVTI EVDSFVAPPI LAWGFEVKQV
YEVLDKKIKL TTSLKPIGHK DEFIPKTIPR LGYQFIISDK LGSNVRWFGR GPGESYSDKK
EGQWFDVHRL PLDKLDYSYD YPQENGNHED TDWVLLESKE EVKGTQAENG AKTFGFKASD
SWRVDEAQHP SDIVHDRRFI RLDYKQHGVG TEACGPGPLA EYQFRLNGPI EFEFTLDMIT
N
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