| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29938 |
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| Symbol | |
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| ID | 4837558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1546427 |
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| End bp | 1548349 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388873 |
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| Product | predicted protein |
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| Protein accession | XP_001383069 |
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| Protein GI | 150864309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00383376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG ACAATGGCGA TAGCGGGAAG AAGCATGTAC GTCAATCTGG ACGGAAATTC
CGCGGGAATC TCAACTACGT GAACTTCTAC AATCGACATG TCCAGGAGAC ATTTGCACCG
AAACATAATT GGCTACACTT TAGCAATTCG AAGCTAACTC ACGATGGAAA GGTATATTAT
TCTCGTGATT TCCGAGATCA AATTCGTGCA ATGAAACAAA AAGAACATGT AGATCCTAAC
AGCGATAACA AGTCGCTTCT AGAAAATTGT CCTGGCACCT TGTGGACCAG GGCCGAGAAG
GAGATCTTTT TCGATGCACT TCTGAAGTGT TCTATCCATC GCATTGATCT CATACAGTTC
AGACTTCCTG GAAAGTCCGA GTTGGAGATT TTAGCCTATT ACGACCTATT GAAAGCCGGA
TTGCAGAAGG CTAGACTGAA AAAGAGAAAG ACCTATGATT ACGAAGTAAA TGGCCAGCCT
CGCAAGATCC AATTGACAAG AAATACAAAG CATCTTATGA AGTACAGTGA AATCCCAATT
GCTTACGAGA TGAGCGAATA CTTTATCAAA TTTGAAGAGC TTCAGAGTGA GCTGATTTCA
ATCAAGGAAA AGAGAAAGGA AAACGATTAC AATACCAACT ATAAATCACA ATTCAAAAAG
TATACCGAAA TTGTGCGACG AGAGGTTCCG GCCGAATTCC TTAATGGAAA TTCAATGTTA
AATAAGAATG AACAAAGAGA AGCTCCAGAA TCAGCTGAAG AACAGCAAAT AGACCCACAA
CTAATATATA CAGATAGGGA GCAGAAACAG CATGAAATAG TCAACAAGGT ATTGACTATA
GATGAGTTTG ACGAGCCAAT ATCGCAATAC CAGACACTTT TGAAGTTGGA AAACTTCCAG
CAAATCACAG ATACGTTCTA TCTTCAGAGC AACATAACAG ACTCCGAGCC ATACCTAACG
TCAAAATTCA GTCTTGGACT TGGATATGAT GCTTTACTTT TACTTGAAGC TCTTGCGAAA
CAGATAACGA GAAAAATTAT TGCCAACATT GTACAAAAAG TACAATTTCA GAGAAGTTTG
GCGAAGAGCC GGATCCATAA TCCCAACGAA GAGATCTACA TCAAGATTCA AGATGTGATG
AAATCCATAT TATCCTTAGG GTACAGGGAA CCTGATGATA TGTTCAACAA GGATGTCTAT
TGGCGAGGGC TTGTAGACAG ATTAAAGTGC GATAAAGAAG AAGAAGATAA GTATCTGCTA
AAAGATCGAC TATACCTGAA GTTCCATTTG CTTCTGGAAA ACAATGATCT TCGACTTTTT
GACAATTACA AAGACGTCCA TGTTTCTTCA TTTTCGCCAA CGCAAGAAGA TGTTGAACGC
AGTCAAGACG ATGGAAGCGA AGAGGACGAG GACCCAGAGA GTGCAATTCC GCACATTTCC
ACTTTATTAG CACAAACAAG AAAGAGTCAG AGACGAGGAG AACAAGACCG TGAGAATGTT
GAAGAGAAGT TACTACTTTT AGCAGAAGAT GCATTGGAAA GGAGAGATAG AGACGAATCA
ACAATGCACG AGCACGGATT ACTCACATAC CTATCAACAG ATCAAGATGG TATTTGCCCA
CCTATGTATA CTACAGAAGA GGCTGAGGAG GTGTTGCGGA TGTGGGATTT AGAAATAGAG
GAGCAGGCAG AGAATTTAGA GGCTGGCGAA GAAAACGATC TAAACGAAAC TTCCGAGAGC
GTACAGAAGG AAGGATTGGC CATTGACGAC GACAATGAGT CGTCAGATGA AAATGCGAGT
GACGATACCG ACGGACATGA AACAATAGCT ATGACTGAAG GTTTTGTTGC TTCCCAACCC
ATGCTAGAAA ATTACGAATT AGAATTTGCC AGATACGAAC GAGGAGAAGC CTATTGTACC
TGA
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| Protein sequence | MNQDNGDSGK KHVRQSGRKF RGNLNYVNFY NRHVQETFAP KHNWLHFSNS KLTHDGKVYY
SRDFRDQIRA MKQKEHVDPN SDNKSLLENC PGTLWTRAEK EIFFDALSKC SIHRIDLIQF
RLPGKSELEI LAYYDLLKAG LQKARSKKRK TYDYEVNGQP RKIQLTRNTK HLMKYSEIPI
AYEMSEYFIK FEELQSESIS IKEKRKENDY NTNYKSQFKK YTEIVRREVP AEFLNGNSML
NKNEQREAPE SAEEQQIDPQ LIYTDREQKQ HEIVNKVLTI DEFDEPISQY QTLLKLENFQ
QITDTFYLQS NITDSEPYLT SKFSLGLGYD ALLLLEALAK QITRKIIANI VQKVQFQRSL
AKSRIHNPNE EIYIKIQDVM KSILSLGYRE PDDMFNKDVY WRGLVDRLKC DKEEEDKYSL
KDRLYSKFHL LSENNDLRLF DNYKDVHVSS FSPTQEDVER SQDDGSEEDE DPESAIPHIS
TLLAQTRKSQ RRGEQDRENV EEKLLLLAED ALERRDRDES TMHEHGLLTY LSTDQDGICP
PMYTTEEAEE VLRMWDLEIE EQAENLEAGE ENDLNETSES VQKEGLAIDD DNESSDENAS
DDTDGHETIA MTEGFVASQP MLENYELEFA RYERGEAYCT
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