Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_20287 |
Symbol | |
ID | 4836694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 460275 |
End bp | 461207 |
Gene Length | 933 bp |
Protein Length | 311 aa |
Translation table | 12 |
GC content | 50% |
IMG OID | 640388009 |
Product | predicted protein |
Protein accession | XP_001382324 |
Protein GI | 150863750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000360095 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0368137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCCTTTGTCG AAGTTTCCGC TCCCAGCGTG GATCGTCCGT TTGGCTTGCA TCTCTGGCCC ATTTTCTCAG CTGCCTTCGA AGCTGTCGCT GGCTACCCAG CAGAAGAGTT TGACTTTGTG CACCACAAGA CGTTTCTCGC CAACGGCTGG CACGCCATCC TGATCATCAT TGTCTACTAC ATCGTCATCT TCGGTGGCCG TTGGTTGTTG GCTACGTTGA AGGTGCCTGC GCTCAAGTTG AACTTTTTGT TTCAGTTGCA CAATGTGTTT TTGACCGTGG CTTCGTTGGT GTTGTTGCTT TTGGCTGTTG AGCAGTTGGT CCCCATCTTG TACTACCACG GCATCTTCTA CGCCATCTGT GATGTCCAGG CCTTTGCTCC TAAGTTGGTT ACGTTGTACT ACTTGAACTA TTTGACCAAA TACGTAGAGT TGATCGACAC TGTGTTCTTG GTGTTGAAGA AGAAAAAGTT GTTGTTCCTT CACACCTACC ACCATGGTGC TACCGCTTTG TTGTGCTACA CCCAGTTGAC AGGTTCCACC TCAGTGGAAT GGGTCCCTAT CACCTTGAAC TTGGCTGTCC ACGTCGTCAT GTACTGGTAC TATTTCCTTT CAGCCAGAGG CATCAAGGTG TGGTGGAAGG AATGGGTTAC CAGATTCCAG ATCATCCAGT TCTTGATCGA CTTGGTGTTT GTGTACTTCG CCACATACAC CCACTACGCC TTTAGATACT TCCCATGGTT GCCCCACGTC GGCGACTGTT ACGGCTCGGA ACTCGCTGCT GCCTACGGCT ACTTGATCTT GACCTCCTAT TTGTTGCTCT TTATTTCCTT CTACATCAAG GTTTACAAGA CCAAGGGATC GAAAAAGAAG ACTACACCAG CATCCTCCGG CACTTCCTCC GGTGCCACAG CCTCTGGAGT CGCTACTGGT GAA
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Protein sequence | SFVEVSAPSV DRPFGLHLWP IFSAAFEAVA GYPAEEFDFV HHKTFLANGW HAISIIIVYY IVIFGGRWLL ATLKVPALKL NFLFQLHNVF LTVASLVLLL LAVEQLVPIL YYHGIFYAIC DVQAFAPKLV TLYYLNYLTK YVELIDTVFL VLKKKKLLFL HTYHHGATAL LCYTQLTGST SVEWVPITLN LAVHVVMYWY YFLSARGIKV WWKEWVTRFQ IIQFLIDLVF VYFATYTHYA FRYFPWLPHV GDCYGSELAA AYGYLILTSY LLLFISFYIK VYKTKGSKKK TTPASSGTSS GATASGVATG E
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