Gene PICST_20287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_20287 
Symbol 
ID4836694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp460275 
End bp461207 
Gene Length933 bp 
Protein Length311 aa 
Translation table12 
GC content50% 
IMG OID640388009 
Productpredicted protein 
Protein accessionXP_001382324 
Protein GI150863750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.60095e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0368137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCCTTTGTCG AAGTTTCCGC TCCCAGCGTG GATCGTCCGT TTGGCTTGCA TCTCTGGCCC 
ATTTTCTCAG CTGCCTTCGA AGCTGTCGCT GGCTACCCAG CAGAAGAGTT TGACTTTGTG
CACCACAAGA CGTTTCTCGC CAACGGCTGG CACGCCATCC TGATCATCAT TGTCTACTAC
ATCGTCATCT TCGGTGGCCG TTGGTTGTTG GCTACGTTGA AGGTGCCTGC GCTCAAGTTG
AACTTTTTGT TTCAGTTGCA CAATGTGTTT TTGACCGTGG CTTCGTTGGT GTTGTTGCTT
TTGGCTGTTG AGCAGTTGGT CCCCATCTTG TACTACCACG GCATCTTCTA CGCCATCTGT
GATGTCCAGG CCTTTGCTCC TAAGTTGGTT ACGTTGTACT ACTTGAACTA TTTGACCAAA
TACGTAGAGT TGATCGACAC TGTGTTCTTG GTGTTGAAGA AGAAAAAGTT GTTGTTCCTT
CACACCTACC ACCATGGTGC TACCGCTTTG TTGTGCTACA CCCAGTTGAC AGGTTCCACC
TCAGTGGAAT GGGTCCCTAT CACCTTGAAC TTGGCTGTCC ACGTCGTCAT GTACTGGTAC
TATTTCCTTT CAGCCAGAGG CATCAAGGTG TGGTGGAAGG AATGGGTTAC CAGATTCCAG
ATCATCCAGT TCTTGATCGA CTTGGTGTTT GTGTACTTCG CCACATACAC CCACTACGCC
TTTAGATACT TCCCATGGTT GCCCCACGTC GGCGACTGTT ACGGCTCGGA ACTCGCTGCT
GCCTACGGCT ACTTGATCTT GACCTCCTAT TTGTTGCTCT TTATTTCCTT CTACATCAAG
GTTTACAAGA CCAAGGGATC GAAAAAGAAG ACTACACCAG CATCCTCCGG CACTTCCTCC
GGTGCCACAG CCTCTGGAGT CGCTACTGGT GAA
 
Protein sequence
SFVEVSAPSV DRPFGLHLWP IFSAAFEAVA GYPAEEFDFV HHKTFLANGW HAISIIIVYY 
IVIFGGRWLL ATLKVPALKL NFLFQLHNVF LTVASLVLLL LAVEQLVPIL YYHGIFYAIC
DVQAFAPKLV TLYYLNYLTK YVELIDTVFL VLKKKKLLFL HTYHHGATAL LCYTQLTGST
SVEWVPITLN LAVHVVMYWY YFLSARGIKV WWKEWVTRFQ IIQFLIDLVF VYFATYTHYA
FRYFPWLPHV GDCYGSELAA AYGYLILTSY LLLFISFYIK VYKTKGSKKK TTPASSGTSS
GATASGVATG E