| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_12953 |
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| Symbol | |
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| ID | 4837022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2176483 |
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| End bp | 2177205 |
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| Gene Length | 723 bp |
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| Protein Length | 241 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388337 |
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| Product | predicted protein |
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| Protein accession | XP_001383180 |
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| Protein GI | 150864391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000550926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TCCGCTAATT CTTTCATAGG GAAGGAATGG GATAAGATCG CTAGTAAGAT GGCGGTGCCG
CTCTTAGAGC TTGTACTCAC CTATCTCCCA CATCTTCAGT ACACAGAGGA AGCCCGTCAG
GATACCTGGG AGATAGTTGC TATCAAATTG AGCAGTTTTC AGTTTGCACA GACAAAGGAC
GAGCGAGTGC AGCAGATATT GGATATACCG ATTCTCAACG GTATTTTCGT AGAAGAAAGG
TACAATAAGT TTATGGACAG CTTTATAAGA CAATTCTTCG CCTTTCCAGG TATGGACGAG
GAAATGGCCA AGAAGAGGAT GTCCAGCAAG GAGGATTTTA TTCTTTTTGA GTTGTACAAG
ATGAGGGGGT TGGGAGCAGA AACTCTAGCA AAGCTCAGCA AAGAACGATT TGAAGAGCAA
CAAAGGGCTT TGATTAATAG TGAAATGTTT ACTAAGAGAA GCTACAATAT CACAGATGGT
GTCTACAGCG AGGCAATTGA GAATACCAAT AGCAGCGAAG AGGTAGAGGA TTCTTCAACA
GAGAAAGGAG AGCCAGTGAC CAGCACGAGT GTTGCTTTGG CCGAGACAAG GTCTCAACTA
TTAACGAAGC AATTAGAAAT ATTGAACAGA GAACTTGAAA AACTGAATAA GAAGATAGAT
TTGCTAGAGA AGGAGAACAA GACGTTGTTG GACTTGAATC ATGAACTTGT GGAGGAAATT
CAG
|
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| Protein sequence | SANSFIGKEW DKIASKMAVP LLELVLTYLP HLQYTEEARQ DTWEIVAIKL SSFQFAQTKD
ERVQQILDIP ILNGIFVEER YNKFMDSFIR QFFAFPGMDE EMAKKRMSSK EDFILFELYK
MRGLGAETLA KLSKERFEEQ QRALINSEMF TKRSYNITDG VYSEAIENTN SSEEVEDSST
EKGEPVTSTS VALAETRSQL LTKQLEILNR ELEKSNKKID LLEKENKTLL DLNHELVEEI
Q
|
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