Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_12827 |
Symbol | |
ID | 4837533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2640309 |
End bp | 2641082 |
Gene Length | 774 bp |
Protein Length | 258 aa |
Translation table | 12 |
GC content | 36% |
IMG OID | 640388848 |
Product | predicted protein |
Protein accession | XP_001382739 |
Protein GI | 150864055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCCTCGTCTT CTCCTATCAA CAGAAAGGAA AACTTGTCTC CAAATCATTT CAAGTACTAT ACCAACCACT TGAACAAGAC ACAATTCAAC CTTATCTTGA TTAATTGTTC AATCAACTTA ATGAAGACTT TATATAAGGA CTCTGTCGAC GAGAAAGACT TGCGATTCTT CATTATTGAA GTCTTGAGAA GATCAAAGAC TTCTATCCAG TCTTTGCAAT TGGCATGTTA TTACATGTTT AAACTTGTAA AGGACGAGAA AGATGTCGCA TCTGATGTCC ATTTAAAAGA TTACAAAAAA TTATTCTTGG GTTTGGTCAT TCTTTCTCTG AAATTCAACC AGGATTGCAA TTATTCGTTC AAAACTTGGT TAAAGATCTG TGGCATCAAG GAAGACGATC AAAAGAGTAA TTTGAAGACT CTTAGAGAAG TCGAAATTAA GTGCTTAGGC TTGTTGAACT ACGAGCTTTA CCTCAACGGT TTGGCATACG AAAACTGGTG CAACATTCTC ATCATATATG GCTATGACTT TATCAGTTAC CAAATTGTCA ACAGCCGCAA CCATGACGAG AATGAAATTC ACTGGGAATC CAACGATGCT TCCATTTCCA ACAAGTTGAA AAAATGGAAG GGATTCTTTG GTCAACTTTC CATCAACAAT TTGAGTGTTG TTAAAATCAA TTTCAACAAC TATTATGCAA ATCAGATGGA TAGGAAGATC TTCATTGATG CCAAGAAGGC ACCTGTGTCT CTCTTTTCTT CTGGATCTAG AAAG
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Protein sequence | SSSSPINRKE NLSPNHFKYY TNHLNKTQFN LILINCSINL MKTLYKDSVD EKDLRFFIIE VLRRSKTSIQ SLQLACYYMF KLVKDEKDVA SDVHLKDYKK LFLGLVILSS KFNQDCNYSF KTWLKICGIK EDDQKSNLKT LREVEIKCLG LLNYELYLNG LAYENWCNIL IIYGYDFISY QIVNSRNHDE NEIHWESNDA SISNKLKKWK GFFGQLSINN LSVVKINFNN YYANQMDRKI FIDAKKAPVS LFSSGSRK
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