Gene Rsph17029_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4162 
Symbol 
ID4895010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp99440 
End bp100285 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID640110553 
Productflagellin domain-containing protein 
Protein accessionYP_001041865 
Protein GI126464889 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value0.00770352 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value0.325059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA TTCTGACCAA CACCAGCGCC ATGGTTGCGC TGCAGACCCT GCGCAGCATC 
AACAGCGGCC TCGCCAAGAC ACAGGACGAG GTCTCGACCG GCAAGGCCGT GGGCTCGGCC
AAGGACAATG CCGCGATCTG GTCGATCGCC AAGGTGATGG AGACCGACGC CTCGAGCTTC
AAGGTCATCG GCGACCAGCT GGCCGTGGCC GAATCGACCC TCGCCGTGGG CGTGACCGGC
GCCGAACAGG TGGTCAGCCT TCTCAAGGAG ATGAAGGATC TGGCCGCGGG CGCGGCCAAC
GACACGGCCG ATTTCGCCAA GGTGCAGGCC GCCATCACCG CCAAGAGCGA CCAGATCACC
GCCGTCATCA ACGGCTCGCA GCTCAACGGG ATCGCCCTGC TGAAGACCGA CATCAACGGG
TCGGGCGGCA CCGCCTACGA CGTGCTGGCC TCGCTCGACC GCACCAGCGG CACGGTGGCC
ACCAGCGCCG TCTCGATCAC CGTGGCCGGC CCCGACTTCG AGGCCAACGT CAATGCGGCC
GGCGTCACCG CCGTGGCCGA CAAGGCCTCC GCCCTGACGG CGGTGGGCGA GATCGAGGCG
CTGATCGACA CCGCGATCCA GGGCGCCGCC ACCCTCGGCG CCGCCGCCTC GCGCGTGACC
GACCAGAAGG GCTTCGTCAG CAAGCTCGTC GACTCGCTCA AGAACGGGAT CGGCTCGATG
GTCGATGCCG ACATGGAGGC GGCCTCGGCC AAGCTGCAGG CGCTTCAGGT CCAGCAGCAG
CTGGCCACCC AGTCGCTGTC GATCGCCAAC CAGGCGCCGC AGAACATCCT GACGCTGTTC
AAGTGA
 
Protein sequence
MSSILTNTSA MVALQTLRSI NSGLAKTQDE VSTGKAVGSA KDNAAIWSIA KVMETDASSF 
KVIGDQLAVA ESTLAVGVTG AEQVVSLLKE MKDLAAGAAN DTADFAKVQA AITAKSDQIT
AVINGSQLNG IALLKTDING SGGTAYDVLA SLDRTSGTVA TSAVSITVAG PDFEANVNAA
GVTAVADKAS ALTAVGEIEA LIDTAIQGAA TLGAAASRVT DQKGFVSKLV DSLKNGIGSM
VDADMEAASA KLQALQVQQQ LATQSLSIAN QAPQNILTLF K