Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_4070 |
Symbol | |
ID | 4895059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009040 |
Strand | + |
Start bp | 6898 |
End bp | 9072 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640110472 |
Product | ABC transporter related |
Protein accession | YP_001041784 |
Protein GI | 126464808 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.00000105324 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 0.180346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCT TCGATTCCCA GCTTCCCGGG TCCATCGCGC TCGACACGCC CGTGCTGTCG ACGCTGCGCG CGGTGTTTCT GGTGGCGGCC CATCACGGGG TGCTGCTCGG CCCCGACGAG CTGCCCCCGC TCGAGACCGG CGATTTCGCG CCCGATCTGC TGCGGCTTCT GGGCGGCAAG GGGCTGCGCT GCCGGCTGCT GGCCGATGCG GGCTGGCGCA CCGCCTCGCG GCTCGGGCAG GCCTATCCCG CGCTGGCGGA GCTGCGGGGC GGGCACTGGG CGGTGCTGGT CCATGCGGGC GGGGCCGAGG GCGCGCGGAC CGTGGCCCTC CTCGATCCGC GGAACGAGGC CCAGGGGGTG CAGGCCCTGC CCTGGGAGGA CTTCGCCCGG GACTGGACCG GCCGGCTGAT CCTGATCGGG CGCCCCGACC GGCCGAGGGC CGCCGAGACC GCCTTCGGGC TGCGCTGGTT CCTGCCCGCG CTCGCGCGCG AGAAGGGGCT CTTTCTCGGC GTCGCGGTGG CGGTGGTGAT CGGCAACCTG ATCTCCTACG CGCTGCCCCT CCTCATGCAG GCGATGATCG ACCGGGTGAT CGCCTACCGG GCCTGGAACA CGCTCGCCGC GGTCGCCGCG GTCTTCGTGC TGCTGGCGCT GTTCGACGCG GGTTTCGGCT ATGTCCGCCA GCGGCTGAGC CAGATCGCGG GCGGCCGGAT CGACGCCCAT CTGGGAGCCG AGAGCGTGGC CCATCTGCTC TCGCTGCCCA TGACGCTGTT CGAGACCACG CCCGCGGGCG TGCTCGCGCG CAACATCCAG CAGACCGACA GGATCCGCCA GTTCCTGACC GGGCGGCTGC TGCAGACCCT GCTCGACGCG GCCCTCCTGC CCGTGCTCTT CGCCACGCTG GCCTTCCTGT CGGGACGGCT CGCGCTGGTG ATCGCGGCCT ACGGGATCGC CATCGCGGCC TGCATCGCCC TCATGCTGCC GCTCCTCCAG CGGCGGCTGA ACGCGGTCTA TGCGGTCGAG GCCGAGCGGC AGGCCCTTCT GGTCGAGACG CTGCACAACA TGCGCGCGGT GAAATCGCTC GCGGTCGAGC CCGCCCGCGG CGCGCTCTGG GAGGAGAGCC TCGCCCTCTC GGTGCGCAGG CAGTGGGATC TGGGCCGCGT CTCGGCCGTC ACGAGCACGC TCACCAGCCT GCTCGAGCGG CTGATGCAGG TGAGCGTGGT GGCCTTCGGC GTGGCCCTGG CGCTCGAGGG CGCGATCACG GTGGGCACGC TCGTGGCGGT GCTGATGCTG GCCGGGCGGG TCAGCGGGCC GCTCGTCCAG ATCGTGGGGC TCGTCAACGA ATGGCAGGAG GCCGCCCTGT CGATCGGGAT GCTGCGCCGG ATCATGGATC ATCCGCCCGA ACGGCCCGAC ACCGCCGCCC TCGCCCGCCC CGCCCTCACC GGCGCGCTCG AGATCCGGGG GGTGAGCTTC GCCTATCCCG GCGCCGCCAC GCCCGCGCTC GATCAGGTGA GCCTCGCCAT CGAGCCCGGG CAGGTGATCG GCATCGTCGG GCGCTCGGGC TCGGGCAAGA CCACGCTCAC CCGGCTCATC CAGGGCATCG AGACCCCGCA GGCCGGGCTG ATCCTGTTCG ACGGGATCGA CATCCGCAGC ATCGCGCTCG GCCCCCTGCG GCGGCAGGTG GGGATCGTGC TGCAGGACAA TCTGCTCTTC CGCGGCACGC TGCGCGAGAA TATCGCCCTC GCCCGCCCCG AGGCCGGGCT CGAGGCGGTG GTGCGCGCGG CCACCCTCGC GGGGGCCGAC GAATTCATCC GCCGCCTGCC GCGGGGCTTC GACACGCCCG TCGAGGAGGG GGGCGCGAAC CTCTCGGGCG GCCAGCGCCA GCGGGTGGCG ATCGCGCGCG CGCTGCTCAC CGATCCGCGC ATCCTGATCC TCGACGAGGC CACGAGCGCG CTCGACCCCG AGTCCGAGGC GGTGGTCAAC CGCAACCTCG CCGCCATCGC CCGCGGCCGG ACCATGATCG TGGTCTCGCA CCGGCTCTCG TCCCTCGTGC GCGCCGACCG GATCGCGGTG CTCGATCAGG GCCGGCTCGT GGCCTTCGCC CCGCACGAGG CGCTGCTCGC GGGCTGCGAG ATCTATGCCC ATCTCTGGCG CCAGCAGACC GAGCATCTGT CATGA
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Protein sequence | MAAFDSQLPG SIALDTPVLS TLRAVFLVAA HHGVLLGPDE LPPLETGDFA PDLLRLLGGK GLRCRLLADA GWRTASRLGQ AYPALAELRG GHWAVLVHAG GAEGARTVAL LDPRNEAQGV QALPWEDFAR DWTGRLILIG RPDRPRAAET AFGLRWFLPA LAREKGLFLG VAVAVVIGNL ISYALPLLMQ AMIDRVIAYR AWNTLAAVAA VFVLLALFDA GFGYVRQRLS QIAGGRIDAH LGAESVAHLL SLPMTLFETT PAGVLARNIQ QTDRIRQFLT GRLLQTLLDA ALLPVLFATL AFLSGRLALV IAAYGIAIAA CIALMLPLLQ RRLNAVYAVE AERQALLVET LHNMRAVKSL AVEPARGALW EESLALSVRR QWDLGRVSAV TSTLTSLLER LMQVSVVAFG VALALEGAIT VGTLVAVLML AGRVSGPLVQ IVGLVNEWQE AALSIGMLRR IMDHPPERPD TAALARPALT GALEIRGVSF AYPGAATPAL DQVSLAIEPG QVIGIVGRSG SGKTTLTRLI QGIETPQAGL ILFDGIDIRS IALGPLRRQV GIVLQDNLLF RGTLRENIAL ARPEAGLEAV VRAATLAGAD EFIRRLPRGF DTPVEEGGAN LSGGQRQRVA IARALLTDPR ILILDEATSA LDPESEAVVN RNLAAIARGR TMIVVSHRLS SLVRADRIAV LDQGRLVAFA PHEALLAGCE IYAHLWRQQT EHLS
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