Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3228 |
Symbol | |
ID | 4810268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3826482 |
End bp | 3827282 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640108662 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001039616 |
Protein GI | 125975706 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TAGCATTGGT ATTAGTAATT ATGAGCGTGT TTATTATGTT GACATCAGCT GCGGCAGCTG CGATAGAATT GCCGTTGAGA GTTGAAGTAA ACGGAGAAAG AGTATATTTT CCGGACGAGC AGCCATTTAT CGATTCAAAC GGGAGGACCC AGGTACCGGC GAGATTTATA GCGGAGAAGT TGGGAGCGAA TGTAACATGG GATGGAAAAG AGAAAAAGGC AGTGTTTGAG AAAGGAAGCA AGAAACTTGT TTTGTACATA GGGAAAGCAG AATATGAATT AAACGGAGAG CAGAAGAAAA TGGATACAGC TGCACTGCTG ATATCAGGAA GGACATTTGT GCCTGCAAGG TATGTGGCAG AGGCGTTTGA TGCAAAAGTG AGCTGGGACC CGGATATCAG GACTGTATAC ATAAATACAA ATTCGAAGCC ATCTGGCAAA AAGGAAGGGA CAAAGATAGT AGCCGGATTT GAGGTGCCTT TGGATACTAA TTTGGCAGCG GTTGAAGAAG AGTGGGGTGG AAAGACAGAG GCTTGTTTTC AAATTAACTT ACTGCGCGCA GATGTAGAAG GACAAATTGA GGATTTAAGA CAAATACTTT TACAAAAATG TGACAGTAGT ACAGTGGATG AAGTTATAGC TTATGTTTCG CAAAAGAAGG AAAGAAAATA CTACTTGCCG TCAAAATATA TATATGATAA CAAAAGCAAA AGATATATTT GGATAAAAGA GTCTTTTATG GAAGACATAA ATGTTTTCTA TTGCTCTGCA AGCTACACGA GATCTGAATA G
|
Protein sequence | MKKVALVLVI MSVFIMLTSA AAAAIELPLR VEVNGERVYF PDEQPFIDSN GRTQVPARFI AEKLGANVTW DGKEKKAVFE KGSKKLVLYI GKAEYELNGE QKKMDTAALL ISGRTFVPAR YVAEAFDAKV SWDPDIRTVY INTNSKPSGK KEGTKIVAGF EVPLDTNLAA VEEEWGGKTE ACFQINLLRA DVEGQIEDLR QILLQKCDSS TVDEVIAYVS QKKERKYYLP SKYIYDNKSK RYIWIKESFM EDINVFYCSA SYTRSE
|
| |