Gene Cthe_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3228 
Symbol 
ID4810268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3826482 
End bp3827282 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content40% 
IMG OID640108662 
Productcopper amine oxidase-like protein 
Protein accessionYP_001039616 
Protein GI125975706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TAGCATTGGT ATTAGTAATT ATGAGCGTGT TTATTATGTT GACATCAGCT 
GCGGCAGCTG CGATAGAATT GCCGTTGAGA GTTGAAGTAA ACGGAGAAAG AGTATATTTT
CCGGACGAGC AGCCATTTAT CGATTCAAAC GGGAGGACCC AGGTACCGGC GAGATTTATA
GCGGAGAAGT TGGGAGCGAA TGTAACATGG GATGGAAAAG AGAAAAAGGC AGTGTTTGAG
AAAGGAAGCA AGAAACTTGT TTTGTACATA GGGAAAGCAG AATATGAATT AAACGGAGAG
CAGAAGAAAA TGGATACAGC TGCACTGCTG ATATCAGGAA GGACATTTGT GCCTGCAAGG
TATGTGGCAG AGGCGTTTGA TGCAAAAGTG AGCTGGGACC CGGATATCAG GACTGTATAC
ATAAATACAA ATTCGAAGCC ATCTGGCAAA AAGGAAGGGA CAAAGATAGT AGCCGGATTT
GAGGTGCCTT TGGATACTAA TTTGGCAGCG GTTGAAGAAG AGTGGGGTGG AAAGACAGAG
GCTTGTTTTC AAATTAACTT ACTGCGCGCA GATGTAGAAG GACAAATTGA GGATTTAAGA
CAAATACTTT TACAAAAATG TGACAGTAGT ACAGTGGATG AAGTTATAGC TTATGTTTCG
CAAAAGAAGG AAAGAAAATA CTACTTGCCG TCAAAATATA TATATGATAA CAAAAGCAAA
AGATATATTT GGATAAAAGA GTCTTTTATG GAAGACATAA ATGTTTTCTA TTGCTCTGCA
AGCTACACGA GATCTGAATA G
 
Protein sequence
MKKVALVLVI MSVFIMLTSA AAAAIELPLR VEVNGERVYF PDEQPFIDSN GRTQVPARFI 
AEKLGANVTW DGKEKKAVFE KGSKKLVLYI GKAEYELNGE QKKMDTAALL ISGRTFVPAR
YVAEAFDAKV SWDPDIRTVY INTNSKPSGK KEGTKIVAGF EVPLDTNLAA VEEEWGGKTE
ACFQINLLRA DVEGQIEDLR QILLQKCDSS TVDEVIAYVS QKKERKYYLP SKYIYDNKSK
RYIWIKESFM EDINVFYCSA SYTRSE