Gene Cthe_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3127 
Symbol 
ID4809690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3694668 
End bp3696056 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content37% 
IMG OID640108560 
Productpeptidase M56, BlaR1 
Protein accessionYP_001039515 
Protein GI125975605 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000359349 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT TATTTCTCTC CGTTTTAAAT ATGAGCTTTA CAGCAAGCTA TGTAATTCTG 
TGCGTGATAC TTGTCAGGCT GTTACTTAAA AAAGCTCCAA AATTCATATC CTATGCTTTG
TGGGGAGTTG TTGCCTTCCG CTTAATAGTT CCGTTTTCTT TTGAAAGCAT GTTTAGTCTT
CTGCCTCGAA ATATGAATGC GGCTCCGATT CTTCATGGTG TCATCTATCA GCAAAGTCCG
ACGGTTGTCA GCGGGATGGA AGTAATGGAT TCTTTTTCAG GCCAATCACT TCCTGTATCC
AACATGGGAG CAAGCGCAAA TTCCTCGCAC GTTTACATAG AAATAGCAGC ATATATATGG
GTTTTGGGAA TAACAGCATT GCTTGTTTAT AGTTTAGTGT CGTTTTTAAA ACTAAAAAGG
CAGCTTAAAA GTGCAAAGCT TGTAGACAAA AATATCTTCG AAGCAAAGAA TTTGAAAACT
CCCTTTGTAT TTGGATTAAT AAATCCCAGG ATATATTTAC CGGCCGGGCT TGATGCCACT
GAGAGAAGAT ATATTTTGCT GCACGAACAA ATCCATATCA GGCGCAAAGA TTATATTATT
AAAATATTAG CTTTTTTAAT ACTGTCCATA CACTGGTTTA ATCCTCTTGT TTGGATTGCG
TTCAGATTAA TGAGCAAGGA TATGGAACTT TCCTGTGATG AAAGAGTGCT GAAAGAAATG
GATGAAAATA TTAAAAAACC TTATGCTGCT TCTTTGCTGT CCCTGGCAAC TGAAAGGCAT
ATTTTAAATG GAAGTCCGTT GGCTTTTGGC GAGGGAAATG TAAAGGACAG AATCAAGAAT
GTATTAAGTT ATAAAAAACC GGCTTTTTGG GTGATTACAG TTGCTTTAGC TTTAGCCATA
GTTGTTGGAT TTGGTTTGCT GGCTAATCCT TACGTGGCTA AACCGGATGA AGATAAGTAT
ATATCGCAGC TTTTAAAAAA TAAAACCGAA TATGTAGGCG ATAACTCAAA AGTCGGCGGT
ATCATCTTTT TATTAAAATT TCCTAAAAAC GTAAGTTATG ATTTTTTTGA GCTTTTTACT
GACAAGGAAC CTTATGGAGT AAATATCAAT TTGAAAACGG ATACAGAAAC CAAAAATTTA
TATGTTGGTG AAGAAAACCG GCAGCAGTTT CAAAGTAATG CCGTGATTAT GTTTTCTCTG
ATTGGAAATG TTGAATATAT CAGTTTTACA CTTGATGATG GATTGGAGCC GTATTCTATA
CGGTACACGC GTGAATGGGC GAATAATCAA TGGGGTAAGG ATGTGCGCGA TTTTGCCAAA
AGCGAGGAGG AATTCAGCAA GTTAATTGAT GCCGCATACG GCATTGGCAA AAATGAAGAT
AAACTGTAA
 
Protein sequence
MSKLFLSVLN MSFTASYVIL CVILVRLLLK KAPKFISYAL WGVVAFRLIV PFSFESMFSL 
LPRNMNAAPI LHGVIYQQSP TVVSGMEVMD SFSGQSLPVS NMGASANSSH VYIEIAAYIW
VLGITALLVY SLVSFLKLKR QLKSAKLVDK NIFEAKNLKT PFVFGLINPR IYLPAGLDAT
ERRYILLHEQ IHIRRKDYII KILAFLILSI HWFNPLVWIA FRLMSKDMEL SCDERVLKEM
DENIKKPYAA SLLSLATERH ILNGSPLAFG EGNVKDRIKN VLSYKKPAFW VITVALALAI
VVGFGLLANP YVAKPDEDKY ISQLLKNKTE YVGDNSKVGG IIFLLKFPKN VSYDFFELFT
DKEPYGVNIN LKTDTETKNL YVGEENRQQF QSNAVIMFSL IGNVEYISFT LDDGLEPYSI
RYTREWANNQ WGKDVRDFAK SEEEFSKLID AAYGIGKNED KL