Gene Cthe_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3106 
Symbol 
ID4809732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3662722 
End bp3663105 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content40% 
IMG OID640108534 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001039494 
Protein GI125975584 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GGAAAGTTTC TATAACAAAG CTGTTTACCT TTGACAGCGC GCATCACCTG 
ATAGACTATA ACGGCAAATG CAGGAACATC CACGGGCATA CTTACAAATT GGAGATTACA 
TTGAAAGGTC TTCCTGATGA AAACGGCTTG GTAATGGATT TTCATGATTT GGAAGCTATA 
ATAGAAAATG AGGTACTGGA AAAGGTGGAT CACAAGTACC TTAATGATGT GTTTGATTTT 
AATCCGACCT GTGAAATGAT AGGACTTTGG TTATGGGAAG AGATTTCAAA GCAGGTACAA 
AATACCCGGT GCACCTTGGA AAAACTGGTG CTTTGGGAAA CTCCCACCAG CTATATAACC 
ATTGACAGGA ATGATATGGA GTAG
 
Protein sequence
MKIGKVSITK LFTFDSAHHL IDYNGKCRNI HGHTYKLEIT LKGLPDENGL VMDFHDLEAI 
IENEVLEKVD HKYLNDVFDF NPTCEMIGLW LWEEISKQVQ NTRCTLEKLV LWETPTSYIT 
IDRNDME