Gene Cthe_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3105 
Symbol 
ID4809731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3662022 
End bp3662690 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID640108533 
ProductexsB protein 
Protein accessionYP_001039493 
Protein GI125975583 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAG CTGTTGTATT GTTGTCCGGC GGACTGGACA GTACCACTTG TTTGTCAGTT 
GCCTTGGCGG AAGGCTATGA GGTTTATCCT CTGTCCTTTG ATTACGGGCA GAGAAACAGA 
AAGGAGCTTG AGAGTGCAAA ACAGGTAGTT AAGTATTTTA AACTAAAAGA GCACAAAATC 
GTGAAGATAG GAAATGTGGG AGGAAGCGCT TTGACAGATA TGAACATAGA TGTTCCCGAT 
TATAAAGGGC TTCCGACCAT ACCTGTTACG TATGTGCCTG CAAGAAACAT AATTTTTTTA 
AGCTATGCAG TAGGGTATGC CGAGGTGGTG GATGCCGAAG CCATTTTTAT CGGCGTTAAT 
GCTGTTGATT ACAGCGGCTA TCCGGATTGC AGGCCGGAAT TTATCGAGGC TTTTCAAAAA 
GCAATAAACC TGGGAACGAA GAGCGGAGTG AATGGAAAAC CGGTTAAAAT AATTACTCCG 
TTAATAAATC TTTCCAAAGC CGAAATTATA AAGCTGGCGT GTGAAAACAA TGCCCCCCTT 
CATTTGACCA CAACCTGTTA CAGGGGCGGA GAAAAAGCAT GCGGTGTTTG TGACAGCTGT 
GTTTTAAGAC TGAAGGGATT TAAAGAGGCC GGAATTGTGG ATACCATAGA ATATATGGAG 
AGAACTTAA
 
Protein sequence
MRRAVVLLSG GLDSTTCLSV ALAEGYEVYP LSFDYGQRNR KELESAKQVV KYFKLKEHKI 
VKIGNVGGSA LTDMNIDVPD YKGLPTIPVT YVPARNIIFL SYAVGYAEVV DAEAIFIGVN 
AVDYSGYPDC RPEFIEAFQK AINLGTKSGV NGKPVKIITP LINLSKAEII KLACENNAPL 
HLTTTCYRGG EKACGVCDSC VLRLKGFKEA GIVDTIEYME RT