| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3100 |
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| Symbol | dapF |
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| ID | 4809726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3656550 |
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| End bp | 3657392 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640108528 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001039488 |
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| Protein GI | 125975578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.239794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGTTTA CCAAAATGCA TGGGCTGGGG AATGACTATA TATATGTTAA TTGCTTTGAA
GAGACTGTCG AAAACCCTTC CGAAGTTGCG AAAAAGGTCA GCGACAGGCA TTTTGGCATT
GGTTCCGACG GACTTGTACT GATAATGCCT TCAGAGAGGG CGGACTTTAA GATGAGAATG
TTCAATTCGG ACGGTTCTGA GGCCGAAATG TGCGGAAATG CGATAAGATG TGTGGGGAAA
TATGTATTTG ACCGGGGAAT GACGAATAAA AATGTTATAA GAGTAGAGAC GCTGGCAGGA
ATAAAGGTTC TTGAACTGAC TGTGCAAGAT GGAAAGGCCA AACTTGTAAA AGTTGATATG
GGGGAACCTA TATTGAAGCC GGAAAATATA CCGGTGAACA GTGACAAGGA GATTTTCAGG
ACGGAGCCTG TTGAAATAGA CGGAAAAGAA TTTAAAGTCA CATGTGTGTC AATGGGAAAT
CCCCATGCAG TATCCTATGT CAAGAATGTG GACATTTTTC CTCTTGAAAA AATCGGTCCT
AAAATGGAAC ATCATCCTCT CTTTCCAAAA AGAATAAATG CCGAGTTTGT GGAAGTGATA
GACAGAACCA CCCTGAAAAT GCGGGTTTGG GAAAGAGGCG CGGGGGAGAC TTTGGCATGC
GGAACCGGTG CCTGTGCCGT GCTGGTGGCA TCGGTGCTGA ACGGTGTCAG TGAAAGGAAG
GCAACTGTAA AACTTTTGGG TGGGGACCTT ATTATTGAAT GGAATGAGAA TAACAATCAT
GTCTATATGA CGGGTCCGGC TGTTAAAGTA TTTGAAGGTG AAGTTGACTT GAACGAACTT
TAA
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| Protein sequence | MRFTKMHGLG NDYIYVNCFE ETVENPSEVA KKVSDRHFGI GSDGLVLIMP SERADFKMRM
FNSDGSEAEM CGNAIRCVGK YVFDRGMTNK NVIRVETLAG IKVLELTVQD GKAKLVKVDM
GEPILKPENI PVNSDKEIFR TEPVEIDGKE FKVTCVSMGN PHAVSYVKNV DIFPLEKIGP
KMEHHPLFPK RINAEFVEVI DRTTLKMRVW ERGAGETLAC GTGACAVLVA SVLNGVSERK
ATVKLLGGDL IIEWNENNNH VYMTGPAVKV FEGEVDLNEL
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