| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3064 |
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| Symbol | |
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| ID | 4809938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3604489 |
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| End bp | 3606096 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640108488 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001039453 |
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| Protein GI | 125975543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000038595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AGTCAATCAC AAAAGGTTTT GCGGTACTGT CGGCGGCAGG ACTTATAACA
AAAATATTAT CGGTGCTTTA TATTCCTTTT TTGCTTGCCA TTATCGGAGA TGAGGGAAAT
GGTATTTATG CTGCCGCGTA TCAAGTATAT GTTTTTATTT ATGTTATTGC CAATTCAGGC
ATTCCCGTTG CGATAGCAAA GTCCGTGTCT GAGCTTACCG CTGTGGGAAA CTACAAGGAT
GCTTTGAGAA TCTTTAAAAT ATCGCGTTTT TTCCTTATTA TAATAGGTAC TGTTTTAACA
GTGCTTATGT TTGTCACGGC AAAGCCATTG GCTGTCATGA TTAACTCGGA AAAATCATTC
CTTGCAATAG CGGCATTGTC TCCGACACTG TTTTTTACCG CCCTGGCCTC TGCGTACAAG
GGATATTTCC AGGGCATGAG CAACATGACT CCGACTGCCG TGTCCCAGGT GGTTGAACAG
ATATTCAATA TGATATTCAC AGTGCTTTTT GCAGCGTTGC TAATAAATAA AAGCCTTGAG
GCTGCGTGCG CCGGAGGTAC CGTAGGAACA ACTGTGGGTG CGCTGGCTTC CGTTATTGTC
CTTATATTTA TATACAACAG AAGAAGAGAA GAAATTAACA ATCTGAAGGA ACACAGGAAG
ACTGCAAAGA GATACTCATA CAAGCAGCTT GCGACAAGAA TATTTTATTA CAGCCTACCC
ATAACTGTTT GTGTGGCTGC TCAATATGCT GGAAATCTCA TTGATGTGGC AAATATAAGA
GGGCGTCTTT TGGCCGGCGG CTATACGCTG GAAATGGCAT CGGTCATGCA CAGCTATTTG
TCCAAATACC AGCAAATAAT GAACGCACCG ATTTCCATAG TTTCGGCTCT TGCGGCGGCG
GTGCTGCCTT CCATTTCGGG AGCTGCGGCG GAACAAGATA TAAAGCAGGT TAAGGATAAA
TCCAACCATG CTTTCAGGCT TTGCATGCTG ATAGTAATTC CGTCGGCTGT GGGGTTGTCC
ATATTGAGTG AACCTATTTA CGCCGTATTG AAATACGGAG CGGGTTCCCA CCTTATGCGC
TACGGCTCAA TAGTACTCGT TCTCATGTCC ATTGTACAAA TACAGTCGTC AATTTTGCAG
GGTGCAGGAA AACTGTACAA AGCAACGATA AATGTAATTT TAGGTATTAT CGCAAAGATA
ATTTTCAATT ATATACTTAT AGCAAATCCC AATATAAATA TCATGGGAGC AGTGATAGGA
AGTATAGTGG GATACGGTTT GACCATTATT CTCAATGTTA TGACAGTAAG AAAAGAGTTG
AAAATAAAAA TAAATATACT GAAACAGGCG GTAAAACCGG CTGTTTCATC AGTGGTAATG
GGTATTTTTG TATGGATTGT ATACAAGGGT TTATACTTTG TTTTAGGATT TATTAAGAGC
GCATATCTTG TAAACGCATT ATCTACAGTT GTTTCAGTTC TGTTCGGAAT GGCAATATAT
TTTTATATAA TGATACTTGT CAGGGGAATA ACAAAAAATG ATTTTGACGT ATTGCCGGAA
AAAATCAGAA GAATGATACC CAAATTCGTA TTAAACAAAG CCGTATGA
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| Protein sequence | MKKQSITKGF AVLSAAGLIT KILSVLYIPF LLAIIGDEGN GIYAAAYQVY VFIYVIANSG
IPVAIAKSVS ELTAVGNYKD ALRIFKISRF FLIIIGTVLT VLMFVTAKPL AVMINSEKSF
LAIAALSPTL FFTALASAYK GYFQGMSNMT PTAVSQVVEQ IFNMIFTVLF AALLINKSLE
AACAGGTVGT TVGALASVIV LIFIYNRRRE EINNLKEHRK TAKRYSYKQL ATRIFYYSLP
ITVCVAAQYA GNLIDVANIR GRLLAGGYTL EMASVMHSYL SKYQQIMNAP ISIVSALAAA
VLPSISGAAA EQDIKQVKDK SNHAFRLCML IVIPSAVGLS ILSEPIYAVL KYGAGSHLMR
YGSIVLVLMS IVQIQSSILQ GAGKLYKATI NVILGIIAKI IFNYILIANP NINIMGAVIG
SIVGYGLTII LNVMTVRKEL KIKINILKQA VKPAVSSVVM GIFVWIVYKG LYFVLGFIKS
AYLVNALSTV VSVLFGMAIY FYIMILVRGI TKNDFDVLPE KIRRMIPKFV LNKAV
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