| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2920 |
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| Symbol | rpsE |
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| ID | 4810203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3441461 |
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| End bp | 3441961 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108343 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001039311 |
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| Protein GI | 125975401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000379873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAACGCA TAGATGCAAG TGTATTGGAT CTTAAAGAAA AAGTTGTAAA TATCGGACGT
GTGACCAAGG TTGTTAAGGG TGGTAGGAAT TTTAGGTTTA GCGCCCTTGT TGTTGTAGGA
GACGAAAACG GTCATGTGGG CAGCGGTATG GGTAAAGCCG CTGAAATACC CGATGCAATA
AGAAAAGGTA TAGAGGATGC CAAGAAGAAT CTTATAAAAG TTCCGATAGT TAATACCACA
ATTCCTCATG AGGTAATTGG AGAATTCGGA GCAGGAAAAG TACTTTTAAA ACCGGCACAG
CCCGGTACGG GAGTTATAGC CGGAGGTCCT GTCAGAGCGG TTTTGGAATT GGCAGGTATA
AAAGATATCA GAACAAAATC TTTGGGTTCA AACAACCCGA TAAACATGGT TCATGCAACT
ATAGAAGGGC TCTCTCGACT GAAGACTGCA GAAGAAGTGG CAAAGCTTCG CAATAAGACC
GTGGAAGAAA TATTAGGTTA G
|
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| Protein sequence | MQRIDASVLD LKEKVVNIGR VTKVVKGGRN FRFSALVVVG DENGHVGSGM GKAAEIPDAI
RKGIEDAKKN LIKVPIVNTT IPHEVIGEFG AGKVLLKPAQ PGTGVIAGGP VRAVLELAGI
KDIRTKSLGS NNPINMVHAT IEGLSRLKTA EEVAKLRNKT VEEILG
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