Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2906 |
Symbol | rplB |
ID | 4809117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3435194 |
End bp | 3436021 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640108329 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001039297 |
Protein GI | 125975387 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0172805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTTA AAAAGTATAA TCCAACATCT CCGGGAACAA GGTTTATGAC TGTATCCACT TTTGAGGAGA TAACAAAGAA AGAACCTGAA AAATCATTGT TGGCACCCCT CAAAAAGACT GGCGGCAGAA ACTCGTACGG AAGAATTACG GTTCGCCACC ACGGAGGGGG AGCAAAAAGA AAATATAGAA TAATTGACTT TAAGAGGGAC AAAGACGGAA TAAAAGCAAA GGTTGCGGCT ATAGAATATG ACCCGAACAG AACAGCTTAT ATAGCACTTC TTCATTATGT TGACGGTGAA AAGAGATATA TTATTGCTCC ACACGGATTG AAAGTCGGAG ATATAGTAGA ATCAGGTGAA AATGCTGATA TTAAGCCGGG AAATGCATTA CCGCTTGAAA ATATTCCGGT AGGTACGGAA ATCCATAATA TTGAGTTGAA GCCGGGTAAA GGCGGACAAT TGGTTAGATC GGCAGGAAAT GTTGCACAGC TGATGGCCAA AGAAGGTAAT TATGCGCAGA TAAGATTGCC TTCCGGCGAG GTAAGAATGG TTAGTTTGAA ATGCAAGGCT ACCATAGGGC AAGTAGGCAA CATTGACCAT GAAAATGTCT CAATCGGTAA GGCAGGAAGA AAGAGATGGA TGGGAATAAG ACCCACTGTT CGCGGTGTTG TAATGAACCC GGTTGATCAC CCGCACGGCG GTGGTGAAGG TAAGTCACCG ATTGGTAGAC CAAGTCCGGT AACTCCATGG GGTAAACCGA CATTGGGCTA TAAGACAAGA AAGAAGAACA AGGCAAGTGA CAAGTTCATT ATTAAGAGAA GAAAATAA
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Protein sequence | MPVKKYNPTS PGTRFMTVST FEEITKKEPE KSLLAPLKKT GGRNSYGRIT VRHHGGGAKR KYRIIDFKRD KDGIKAKVAA IEYDPNRTAY IALLHYVDGE KRYIIAPHGL KVGDIVESGE NADIKPGNAL PLENIPVGTE IHNIELKPGK GGQLVRSAGN VAQLMAKEGN YAQIRLPSGE VRMVSLKCKA TIGQVGNIDH ENVSIGKAGR KRWMGIRPTV RGVVMNPVDH PHGGGEGKSP IGRPSPVTPW GKPTLGYKTR KKNKASDKFI IKRRK
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