Gene Cthe_2886 details

Gene Information

• Locus tag: Cthe_2886
• Symbol: hisH
• ID: 4809093
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3412830
• End bp: 3413444
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640108305
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001039277
• Protein GI: 125975367
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGCGG TAATAGATTA TGGAGTAGGT AATTTAAAAA GCGTGGAAAA AGCATTTCAA 
TTTATTGGTT ATGATGCAAG GACAACTTCT GATAAAGAAC TTATTTTAAA TGCGGATTCT 
GTGGTTCTTC CGGGAGTGGG AGCCTTTGCG GATGCCATGG ACAGTCTTTC AAAAAGCGGA 
ATGATTGAAG TAATACAAAA GGTTATTGAC AGCGGAAAAC CGTTTTTGGG CATTTGCCTT 
GGCATGCAGC TTTTGTTTGA GTACAGTGAA GAAGGTGGAC AGAATAAGAA GGGACTTGGG 
ATCTTAAAAG GTGCAATCAA ACAGCTTCCC TTTGGCATGA ATCTTAAGGT GCCTCATATG 
GGATGGAATA GTCTGGAGCT TAAAAACAAG TCTTTGTTGT TTGACGGGCT TCCCCAAAAA 
CCGTATGTTT ATTTTGTTCA CTCTTATTAC CTCGACACTG ATGATGAAGA CATTGTCATT 
GCAAAAACCA ACTATGGTAT CAACTTCTCT GTTGCGGTGC AAAAGCAAAA TGTTTTTGCT 
ACCCAGTTCC ATCCTGAGAA AAGCGGTGAA GTTGGACTTA AAATATTAAA AAATTTTGCG 
GGAATCATAT TCTAA 

 

Protein sequence

MIAVIDYGVG NLKSVEKAFQ FIGYDARTTS DKELILNADS VVLPGVGAFA DAMDSLSKSG 
MIEVIQKVID SGKPFLGICL GMQLLFEYSE EGGQNKKGLG ILKGAIKQLP FGMNLKVPHM 
GWNSLELKNK SLLFDGLPQK PYVYFVHSYY LDTDDEDIVI AKTNYGINFS VAVQKQNVFA 
TQFHPEKSGE VGLKILKNFA GIIF