| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2880 |
|---|
| Symbol | |
|---|
| ID | 4809087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3406523 |
|---|
| End bp | 3407779 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640108299 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_001039271 |
|---|
| Protein GI | 125975361 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.164097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAGAGT GGAAGATATA TACTCCTGAA GGTGTTCAAG ATATACTGCA AAATGAATGT
TTCTTTAAGA AAAACCTGGA GGATCGGATC AGAAAAGTAT TTCGGGCCAG CGGTTACTAT
GAGGTGGAGA CTCCGATTGT AGAGTTTTAT GACGTTTTTT CCACCGAAGA GAATATAATT
CCTCAGGAAA CCATGTTTAA GTTTTTTGAC CAGCAAGGAA GAATTCTGGT TTTAAGACCG
GATCTAACAA TACCTATTGC CAGGGTTGCG GCTACTAAGC TAAAGGATGC GGCTTATCCC
TTGAGAATCT CCTATATCGG CAATGCCTTT AAATATAACG AGCTTGGCGG AGGAAAGCAA
AAGGAGTTCA CCCAGGCCGG TGTTGAAATA ATAGGAGTAA ACACTCCGGA AGCGGATGCC
GAGGTTATAG CTACGGCAAT TGATGCTGTA AAGGCTACAG GACTTGAAAA TTTCCAGATT
GATATCGGTC AGGTGGAATT TTTCAAAGGG CTGATGGAAG AGACCGGTCT TTCGGAAGAA
GAGACCGAGA AGATGAGGGT GCTTATAGAC CGAAAAGACT TTTTGGGAAT TGAGGAATTG
GTTGAGGAGC ACAATATCAG GGATGACCTT AAAGAGCTGA TATTGGACTT TCCTAAATTA
TTCGGTTCAA CAGATGTTAT TGACAGGGTG GAAAAGTATC CTATAAATGA GCGTTCAATT
AAAGCCTTGA ACAATTTAAG GAGCATTATT AATATATTGG ACGATTATGG CCTTTCAAAA
TATGTTTCGG TGGACCTGGG CATGGTACAA AGTCTCAATT ACTATTCCGG TACTATTTTC
AGAGGTTTTA CCTACGGAGT CGGGTTCCCG ATATTAAGCG GCGGAAGGTA TGACCGGTTG
GTGGAGAAAT TCGGAAAGAG CAGCCCCGCA ACAGGCTTTT CCATGGGAAT CAATATGGTA
ATGATGGCCC TCGACAGGCA GAAAGTTGAA TTTGAAAAAC CCAGGGTTGA TACTCTTGTC
TGCTATAGGG AAGAAGGAAG GAAAACAGCT TTTCAAATAT GTGAAACCTT GAGAAAACAA
GGACTTGCCG TGGAGGTGGA TATAAACGGT GGAGACTTTG AAACAGCCAG AAATTATGCG
GCTTTAAAGG GCATAGGAGG CATATTGAAG GTTCTTGATG ATGAAAACAT AGAGATTCAT
AACCTTGAAA AGGGAGAAGT CTCAAAAGTG ACCATAAGTG AGCTTTTGAA GGCATGA
|
|---|
| Protein sequence | MAEWKIYTPE GVQDILQNEC FFKKNLEDRI RKVFRASGYY EVETPIVEFY DVFSTEENII
PQETMFKFFD QQGRILVLRP DLTIPIARVA ATKLKDAAYP LRISYIGNAF KYNELGGGKQ
KEFTQAGVEI IGVNTPEADA EVIATAIDAV KATGLENFQI DIGQVEFFKG LMEETGLSEE
ETEKMRVLID RKDFLGIEEL VEEHNIRDDL KELILDFPKL FGSTDVIDRV EKYPINERSI
KALNNLRSII NILDDYGLSK YVSVDLGMVQ SLNYYSGTIF RGFTYGVGFP ILSGGRYDRL
VEKFGKSSPA TGFSMGINMV MMALDRQKVE FEKPRVDTLV CYREEGRKTA FQICETLRKQ
GLAVEVDING GDFETARNYA ALKGIGGILK VLDDENIEIH NLEKGEVSKV TISELLKA
|
|---|
| |