| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2876 |
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| Symbol | |
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| ID | 4809156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3399024 |
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| End bp | 3401249 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640108295 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_001039267 |
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| Protein GI | 125975357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAT TGAAAGATTT GAATAAGGAA CAAAGGGAAG CGGTACTTCA CGTTGACGGC
CCCTTGCTTG TTCTTGCCGG TGCGGGAAGC GGAAAGACAA AAGTGCTTAC GCACAGGATT
GCGTATTTAA TTAAAGAGAA AAATGTACAT CCTGCCAGTA TCCTTGCCAT AACTTTTACC
AACAAGGCTG CAAGGGAAAT GAGAGAAAGA ATAGACCGGC TTGTTGAAGA TGTCAGTGAC
AGTATATGGG TAAGTACTTT TCATTCCATG TGTGTAAGGA TACTAAGAAG GGATATAGAA
AAAATAGATT ATGATAAAAA CTTTGTGATA TTTGACTATG CCGATCAGCA AAATGTTGTA
AAAGACTGCC TGAAGGAACT TAATCTCAGT GATAAAAACT TTCCTCCGAA GTCAATATTG
GAGATGATCG GAAGGGCAAA GGACGAGCTT ATCACTCCGG ACTCTTATTT AAAAATGTAT
TCCGGAGATT TCAGGATGGA GAAGATCGCC CGGGTCTATG AGCTTTATCA AAAGAAGCTG
AAGCAAAATA ACGCTTTGGA TTTTGACGAT ATTATAATGC TTACGATAAA GCTTTTTTTG
GACAATCCCG AAGTGCTGAA TTATTACCAG AGAAAATTCA AATATATTCT GGTGGATGAG
TATCAGGACA CCAACACAGC CCAGTATTCC CTTGTAAGCC TTTTGGCACA GGGGTACAGA
AATCTTTGTG TTGTTGGGGA CGACGACCAG TCCATCTATG GTTGGAGAGG CGCCAATATA
AGAAATATTC TGGATTTTGA GAAGGAGTTT AAGGATGCAA AAGTAATAAA GCTTGAGCAG
AACTACCGTT CAACCCAGAT TATCCTTGAT GCGGCAAACC ATGTTATCAA GAACAATGTG
GGAAGAAAAG CCAAAAGGCT TTGGACAAAC AATAAAGGAG GAGACGGGAT TAGATATCTC
GAGTGCCTGA ATGAGCATGA AGAGGCGTAT TTTGTGGCAA GTGAGATAAA GAGGCTCTGC
AGGGAGCAGA ACCGCTCTTA CAAGGATTTT GCCGTACTTT ATCGTATAAA TGCCATGTCC
CGTGTTATTG AGGATGAGCT TATGAGGGAA GGAATAAGCT ACAAGATATT TGGAGGGCTT
AGGTTCTATG ACAGAAAAGA AATAAAAGAT GTAATTGCCT ATCTTCGTGT TATTCAAAAT
CCTTCGGATA ACATAAGTCT AAAGAGGATA ATAAATGAGC CTAAAAGAGG TATTGGAAAT
GCGACCATAG ATACTGCAGA GAGACTGGCA AATGAAAGGG GAGTCAGCAT TTTCTCAATT
ATTTCATCGG CGGCGGAAAT TCCCGAGCTT GCCCGGGCTT CGTCAAAGCT TGAAAAGTTT
GTCTCGCTGA TAAACAGCCT GAGGGCCCAA AGTATGGTGA TGACCGCATC GGAAATGATT
GAGGAGGTCC TTGAGAGGAC GGGCATTTTG GAGGCGTATA GACAGGAAAA TACCCTGGAA
GCCCAGAGCA GAATAGAAAA CATAAAAGAG TTGCTCTCCG TTGCAATTGA ATTTGAAAAT
GAAAGCGAGG AAAAGAGCCT TACGGATTTT CTTGCCCATG TGTCCCTGGT TTCGGATGTC
GATACGATGG ATGAAAACAG TGAATATGTT GCTCTTATGA CCCTTCACAG CGCAAAGGGA
TTGGAGTTTC CGGTGGTATT TCTGGTGGGA ATGGAGGAAG GTATTTTCCC GGGTTACAGG
TCAATGACCA ATGAATCGGA GCTGGAGGAG GAGAGGAGGC TTTGTTATGT AGGCATAACG
AGGGCGAAAG AAAACCTTTA CATGACAAGC ACCTTCAGCC GTACGTTGTT TGGAAATACC
ACCTACAACA GAGTTTCAAG ATTTGTTAAA GAAATTCCCG AGGAGCTTTT TGATTTCGGC
GGGGATAAAA AGAAAGCAAA GGATGAGAAC ATTGGCGAAG GAACGGCAAA AAAGAGCGGT
ACATTAAACA AGGACTTTAA CTCTTCTAAA AGCTTTAATG CGGTAAGCTT TAAGCCTGTG
CAAAGGACGG AGACGTCAAA AACGGAGCTT AAAGTTGGTG ACGTGGTGCG GCACAAAGTC
TTCGGGGAAG GAATTATAAC AAAAAGAGAG CCTGACGGCG ATGATTTCAA ACTGGAGATA
CATTTTAAGG GAAAAGGCAT GAAGAGGCTT TTGGAAAGCT ATGCGAATCT GACTAAGGTG
AATTAA
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| Protein sequence | MDLLKDLNKE QREAVLHVDG PLLVLAGAGS GKTKVLTHRI AYLIKEKNVH PASILAITFT
NKAAREMRER IDRLVEDVSD SIWVSTFHSM CVRILRRDIE KIDYDKNFVI FDYADQQNVV
KDCLKELNLS DKNFPPKSIL EMIGRAKDEL ITPDSYLKMY SGDFRMEKIA RVYELYQKKL
KQNNALDFDD IIMLTIKLFL DNPEVLNYYQ RKFKYILVDE YQDTNTAQYS LVSLLAQGYR
NLCVVGDDDQ SIYGWRGANI RNILDFEKEF KDAKVIKLEQ NYRSTQIILD AANHVIKNNV
GRKAKRLWTN NKGGDGIRYL ECLNEHEEAY FVASEIKRLC REQNRSYKDF AVLYRINAMS
RVIEDELMRE GISYKIFGGL RFYDRKEIKD VIAYLRVIQN PSDNISLKRI INEPKRGIGN
ATIDTAERLA NERGVSIFSI ISSAAEIPEL ARASSKLEKF VSLINSLRAQ SMVMTASEMI
EEVLERTGIL EAYRQENTLE AQSRIENIKE LLSVAIEFEN ESEEKSLTDF LAHVSLVSDV
DTMDENSEYV ALMTLHSAKG LEFPVVFLVG MEEGIFPGYR SMTNESELEE ERRLCYVGIT
RAKENLYMTS TFSRTLFGNT TYNRVSRFVK EIPEELFDFG GDKKKAKDEN IGEGTAKKSG
TLNKDFNSSK SFNAVSFKPV QRTETSKTEL KVGDVVRHKV FGEGIITKRE PDGDDFKLEI
HFKGKGMKRL LESYANLTKV N
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