Gene Cthe_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2796 
Symbol 
ID4810113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3295743 
End bp3296930 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID640108216 
Productpyruvate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_001039188 
Protein GI125975278 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGATA AAGCGTTTCT TTCGGGAAAT GAAGCAGTGG CGGAAGGAGT GCGGCTTGCA 
AGTCCCCATG TGATTGCCGC TTATCCGATT ACTCCCCAGA CGGTTGTGGT GGAGCGGTTG
GCGGAAATGG TGGAGGACGG AAGGCTTAAA GCGGAATTCC TTCATGTGGA GTCCGAACAT
TCGGCCCTGT CTGCATGCAT GGGAGCCGCC AGTATTGGGG CAAGAACTTT TACGGCAACT
TCATCCCAGG GGCTTTTGTA TATGGCTGAA TGCCTTCATT ATGCCAGCGG AGGGAGATTC
CCCATTGTAA TGATGAATGC CAACCGTTCC CTTGCGCTAC CGTGGAGTAT ATACGGCGAT
CACAGGGATT CCTTGTCGCA GCTGGACTGC GGCTGGATAC AGATATATGT GGAGGACGCC
CAGGAAAGCC TGGATATGGT GATTCAGGCT TATAAAATAG CGGAAAATCC AAAGGTGCTT
ACACCGGTCA TGATAAATCT CGACGGATTT GTGCTTACCC ACACTTATGA GCCGGTGGAT
ATTCCTTTGA AAGAAGAAGT GGATAAGTTT CTGCCGCCTT TTGAAACCCC ATACAAAATG
GATTTGAAAA ATCCCAAGAA CATGGGTTTT AGTTCTTCGC CTTCAGACAA CACGGAGTTC
AAATACCTGC AGCACAAGGC CATATTGGAT GCGAAAGAGG TAATAAAAGA AGTGGACAGT
TCCTTCAAAA AAGCTTTCGG AAGAAACTAT GGAGGTCTTG TTGACGCATA CTTGTGCGAG
GACGCGGAGT TTATCATGAT AAGCCTTGGC AGCACCACAG GAACGTGCAG AGCGGTGGTG
GATGAGCTAA GGCGGGAAGG ATTTAAAGCA GGAGTGCTGA AAATACGTTT CATGCGGCCG
TTTCCTGAAG AGGAAATAGT AGAAATTACT AAGAATGCAA AGGCTGTGGG AGTGATAGAC
AGGGATATAT CTTTTGGATA TGAGGGAACG GTCTTTACCA ATGTCAACTC CGCTCTTTTA
AAGGCAGGGG TGGATGTGAA GAGCGTAAAC TTTATAGCCG GGCTTGGAGG ACGGGATATT
TCCAAAGAAA GCATACGGGA GGCATTCCAT GATTTGAGGG AAGTTGCTCT GGGCACTTTA
AAGAAGTGGT TTAAGTTTTT GAGTCTGGGG GTATCTATAG ATGAGTAA
 
Protein sequence
MGDKAFLSGN EAVAEGVRLA SPHVIAAYPI TPQTVVVERL AEMVEDGRLK AEFLHVESEH 
SALSACMGAA SIGARTFTAT SSQGLLYMAE CLHYASGGRF PIVMMNANRS LALPWSIYGD
HRDSLSQLDC GWIQIYVEDA QESLDMVIQA YKIAENPKVL TPVMINLDGF VLTHTYEPVD
IPLKEEVDKF LPPFETPYKM DLKNPKNMGF SSSPSDNTEF KYLQHKAILD AKEVIKEVDS
SFKKAFGRNY GGLVDAYLCE DAEFIMISLG STTGTCRAVV DELRREGFKA GVLKIRFMRP
FPEEEIVEIT KNAKAVGVID RDISFGYEGT VFTNVNSALL KAGVDVKSVN FIAGLGGRDI
SKESIREAFH DLREVALGTL KKWFKFLSLG VSIDE