| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2752 |
|---|
| Symbol | |
|---|
| ID | 4810255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3247670 |
|---|
| End bp | 3249001 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640108172 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_001039144 |
|---|
| Protein GI | 125975234 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACAT TTTTTAAGAA CATCATGCCT CGTTGGTGCC ATATTAGACC CGCATATTTC
CTCCAGGTTT TACTTATTGC CGGTTTTATG ATATTATCGG GGTGCAACGC TGACAGTGGT
GGCTACGCTA ACAATCGTAC AACAGTAATG TCAGAAGAAA TCCAGGCTGA CAGCAGTAAT
TCCTCAGAAG AGGGCAATTT TGTTGATGTG GCTGAAACGG CAGAACCATC TTCTGCTGCT
GATAATTCAC AAAAATCCGG TGATTTGCAG GAGACGGTCA AGTCGCAAAA ACAGGACACA
ATAGAAAGCA ATGCTTCAAA TGGCCGGCTG GAAATAACGT TTCTTGATGT CGGGCAGGCA
GACTCAATTC TTATATCACA AGGCCAATAC CACATGCTTG TGGATGCCGG AAACAATGCT
GATGCGGAAC AGGTGGTTAA TTATCTTAAA AACAAAGGAA TCCGCAAGTT GGAATATGTG
ATTGGTACTC ACGGACACGA AGACCATATC GGAGGCCTTG ATGAAGTTAT TAAAAGTTTT
GAAATAAGCA AAATTTTAAT GCCGAAACAA ATAAACACAA CAAAGACTTT TGAAGACGTA
TTGGTTGCCA TACGAAATAA AGGCATGAAA GTTACCGCTC CCAAAGTAGG GGATGTTTAT
GAGCTCGGCA GGGCAAAATG GACCGTTTTG GCTCCAGGCA GAGAAGAATA CGAGAATATC
AACAACTCAT CCATAGTAAT CCGCCTGACG TTTGGCAATA ATTCATTTTT GTTTATGGGC
GATGCTGAGG AATTATCTGA ACGGGAAATC CTGGCAAACA ATCTTGAAAT AAAATCTGAC
TTGATAAAAA TAGGACATCA TGGCAGTTCA AATTCAACAA CGTCTGAATT TTTGGAAAAG
GTGTCTCCCA AGTATGCGGT CATTAGCGTA GGCAAAGGAA ATGATTACGG GCATCCTCAT
ACCCAAACGC TGGATAAACT CAATGCAGCA GGAATACAAA TATATCGGAC GGACATATCA
GGTACTATAA TTGTCACCAG CGACGGAAAA TCTATCACCT TTGACAAAAA GGCTTCTCCT
GTTAAAGAGA ATGCGCCGCC GGCTTCGGAT AAACCAGGTG TGCAAACTGA ATCAAGTGAT
AGTAAAAGTA ACATTTCCGC CAACAGCAAT GCTGAGCAGT CGAAAGAAAT TGTTGTATAT
ATAACAAAAA CTGGAGAGAA ATACCATACA GGCGGTTGCA GTTATCTGAG GAAAAGCAGT
ATCCCTGTAA AGTTGTCCGA TGCAAAAAAC AGAGGATATA CACCTTGCAG CAGGTGTAAT
CCGCCAAGAT AG
|
|---|
| Protein sequence | MYTFFKNIMP RWCHIRPAYF LQVLLIAGFM ILSGCNADSG GYANNRTTVM SEEIQADSSN
SSEEGNFVDV AETAEPSSAA DNSQKSGDLQ ETVKSQKQDT IESNASNGRL EITFLDVGQA
DSILISQGQY HMLVDAGNNA DAEQVVNYLK NKGIRKLEYV IGTHGHEDHI GGLDEVIKSF
EISKILMPKQ INTTKTFEDV LVAIRNKGMK VTAPKVGDVY ELGRAKWTVL APGREEYENI
NNSSIVIRLT FGNNSFLFMG DAEELSEREI LANNLEIKSD LIKIGHHGSS NSTTSEFLEK
VSPKYAVISV GKGNDYGHPH TQTLDKLNAA GIQIYRTDIS GTIIVTSDGK SITFDKKASP
VKENAPPASD KPGVQTESSD SKSNISANSN AEQSKEIVVY ITKTGEKYHT GGCSYLRKSS
IPVKLSDAKN RGYTPCSRCN PPR
|
|---|
| |