Gene Cthe_2748 details

Gene Information

• Locus tag: Cthe_2748
• Symbol: smpB
• ID: 4810250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3241796
• End bp: 3242260
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640108167
• Product: SsrA-binding protein
• Protein accession: YP_001039140
• Protein GI: 125975230
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000119247
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGG AAGAAAAAAG GGTTGTAGCG CAGAATCGAA AAGCAAGGCA TGACTATTTT 
ATTGAACAGA CTATTGAGGC GGGTATAGTT TTGTCAGGCA CCGAAGTTAA ATCAATCAGG 
GCCGGCAAAG TAAGCCTCAA GGACAGTTAT GCCAATGTCA AAAACGGTGA AGTGTTTATA 
TACGGCATGC ATATCAGTCC CTATGAGCAG GGCAATATAT TCAACAAGGA CCCTTTGAGG 
GACAGAAAGC TTCTTTTGCA CAGAGCTGAA ATAAACAAGC TTATAGGTTA TATTCAGCAA 
AAGGGAATGA CTTTGGTACC GCTGGAAGTC TACTTTAAAA ACGGCAAAGT GAAAATTGAG 
CTTGGCATAG CAAAAGGTAA GAAGCTCTAT GACAAGAGAG AGGATATTGC CAAAAGGGAT 
GCTTTAAGAG AGATTGACAG AAGGCTGAAA GAGAACTTTA GATAG 

 

Protein sequence

MAKEEKRVVA QNRKARHDYF IEQTIEAGIV LSGTEVKSIR AGKVSLKDSY ANVKNGEVFI 
YGMHISPYEQ GNIFNKDPLR DRKLLLHRAE INKLIGYIQQ KGMTLVPLEV YFKNGKVKIE 
LGIAKGKKLY DKREDIAKRD ALREIDRRLK ENFR